Gene : AT5G10900 A. thaliana TAIR10
Defline:  (1 of 3) K04460 - serine/threonine-protein phosphatase 5 (PPP5C) Genomic Order:  1012
Name:  ? AT5G10900 Secondary Identifier:  ? PAC:19672551
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G10900 0.5kb upstream 0.5kb upstream 3849 true Chr5: 3435949-3439797 Arabidopsis thaliana
AT5G10900 0.5kb upstream 0.5kb upstream 500 false Chr5: 3439298-3439797 Arabidopsis thaliana
AT5G10900 0.5kb downstream 0.5kb downstream 3849 true Chr5: 3435449-3439297 Arabidopsis thaliana
AT5G10900 0.5kb downstream 0.5kb downstream 500 false Chr5: 3435449-3435948 Arabidopsis thaliana
AT5G10900 1.0kb upstream 1.0kb upstream 4349 true Chr5: 3435949-3440297 Arabidopsis thaliana
AT5G10900 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3439298-3440297 Arabidopsis thaliana
AT5G10900 1.0kb downstream 1.0kb downstream 4349 true Chr5: 3434949-3439297 Arabidopsis thaliana
AT5G10900 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3434949-3435948 Arabidopsis thaliana
AT5G10900 2.0kb upstream 2.0kb upstream 5349 true Chr5: 3435949-3441297 Arabidopsis thaliana
AT5G10900 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3439298-3441297 Arabidopsis thaliana
AT5G10900 2.0kb downstream 2.0kb downstream 5349 true Chr5: 3433949-3439297 Arabidopsis thaliana
AT5G10900 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3433949-3435948 Arabidopsis thaliana
AT5G10900 5.0kb upstream 5.0kb upstream 8349 true Chr5: 3435949-3444297 Arabidopsis thaliana
AT5G10900 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3439298-3444297 Arabidopsis thaliana
AT5G10900 5.0kb downstream 5.0kb downstream 8349 true Chr5: 3430949-3439297 Arabidopsis thaliana
AT5G10900 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3430949-3435948 Arabidopsis thaliana
AT5G10900 10.0kb upstream 10.0kb upstream 13349 true Chr5: 3435949-3449297 Arabidopsis thaliana
AT5G10900 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3439298-3449297 Arabidopsis thaliana
AT5G10900 10.0kb downstream 10.0kb downstream 13349 true Chr5: 3425949-3439297 Arabidopsis thaliana
AT5G10900 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3425949-3435948 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665434 5273 Angiosperm View MSA
122367282 5261 Brassicaceae View MSA
123799324 5264 Brassicales-Malvales View MSA
124340412 5266 SBM View MSA
124238927 5268 Malvidae View MSA
124050486 5270 Rosid View MSA
123619802 5271 Pentapetalae View MSA
122654237 5272 Eudicot View MSA
123429115 5275 Viridiplantae View MSA
120937401 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.89        
cufflinks 2.633        
cufflinks 1.23       Low
cufflinks 2.391        
cufflinks 1.241       Low
cufflinks 2.8       High

0 Strain