Gene : AT5G08710 A. thaliana TAIR10
Defline:  (1 of 23) KOG1427 - Uncharacterized conserved protein, contains RCC1 domain Genomic Order:  819
Name:  ? AT5G08710 Secondary Identifier:  ? PAC:19670685
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G08710 0.5kb upstream 0.5kb upstream 3848 true Chr5: 2834743-2838590 Arabidopsis thaliana
AT5G08710 0.5kb upstream 0.5kb upstream 500 false Chr5: 2838091-2838590 Arabidopsis thaliana
AT5G08710 0.5kb downstream 0.5kb downstream 3848 true Chr5: 2834243-2838090 Arabidopsis thaliana
AT5G08710 0.5kb downstream 0.5kb downstream 500 false Chr5: 2834243-2834742 Arabidopsis thaliana
AT5G08710 1.0kb upstream 1.0kb upstream 4348 true Chr5: 2834743-2839090 Arabidopsis thaliana
AT5G08710 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2838091-2839090 Arabidopsis thaliana
AT5G08710 1.0kb downstream 1.0kb downstream 4348 true Chr5: 2833743-2838090 Arabidopsis thaliana
AT5G08710 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2833743-2834742 Arabidopsis thaliana
AT5G08710 2.0kb upstream 2.0kb upstream 5348 true Chr5: 2834743-2840090 Arabidopsis thaliana
AT5G08710 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2838091-2840090 Arabidopsis thaliana
AT5G08710 2.0kb downstream 2.0kb downstream 5348 true Chr5: 2832743-2838090 Arabidopsis thaliana
AT5G08710 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2832743-2834742 Arabidopsis thaliana
AT5G08710 5.0kb upstream 5.0kb upstream 8348 true Chr5: 2834743-2843090 Arabidopsis thaliana
AT5G08710 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2838091-2843090 Arabidopsis thaliana
AT5G08710 5.0kb downstream 5.0kb downstream 8348 true Chr5: 2829743-2838090 Arabidopsis thaliana
AT5G08710 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2829743-2834742 Arabidopsis thaliana
AT5G08710 10.0kb upstream 10.0kb upstream 13348 true Chr5: 2834743-2848090 Arabidopsis thaliana
AT5G08710 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2838091-2848090 Arabidopsis thaliana
AT5G08710 10.0kb downstream 10.0kb downstream 13348 true Chr5: 2824743-2838090 Arabidopsis thaliana
AT5G08710 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2824743-2834742 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367213 5261 Brassicaceae View MSA
123831907 5264 Brassicales-Malvales View MSA
124321754 5266 SBM View MSA
124242331 5268 Malvidae View MSA
124067289 5270 Rosid View MSA
123750036 5271 Pentapetalae View MSA
122789173 5272 Eudicot View MSA
122046022 5273 Angiosperm View MSA
121348497 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.207        
cufflinks 3.372        
cufflinks 6.705       High
cufflinks 3.287        
cufflinks 7.305       High
cufflinks 2.611       Low

0 Strain