Gene : EXL4 A. thaliana TAIR10
Primary Identifier:  ? AT5G09440 Defline:  (1 of 2) PTHR31279//PTHR31279:SF12 - FAMILY NOT NAMED // PHI-1-LIKE PROTEIN
Genomic Order:  852 Name:  ? AT5G09440
Secondary Identifier:  ? PAC:19670467
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G09440 0.5kb upstream 0.5kb upstream 1615 true Chr5: 2937847-2939461 Arabidopsis thaliana
AT5G09440 0.5kb upstream 0.5kb upstream 500 false Chr5: 2937847-2938346 Arabidopsis thaliana
AT5G09440 0.5kb downstream 0.5kb downstream 1615 true Chr5: 2938347-2939961 Arabidopsis thaliana
AT5G09440 0.5kb downstream 0.5kb downstream 500 false Chr5: 2939462-2939961 Arabidopsis thaliana
AT5G09440 1.0kb upstream 1.0kb upstream 2115 true Chr5: 2937347-2939461 Arabidopsis thaliana
AT5G09440 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2937347-2938346 Arabidopsis thaliana
AT5G09440 1.0kb downstream 1.0kb downstream 2115 true Chr5: 2938347-2940461 Arabidopsis thaliana
AT5G09440 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2939462-2940461 Arabidopsis thaliana
AT5G09440 2.0kb upstream 2.0kb upstream 3115 true Chr5: 2936347-2939461 Arabidopsis thaliana
AT5G09440 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2936347-2938346 Arabidopsis thaliana
AT5G09440 2.0kb downstream 2.0kb downstream 3115 true Chr5: 2938347-2941461 Arabidopsis thaliana
AT5G09440 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2939462-2941461 Arabidopsis thaliana
AT5G09440 5.0kb upstream 5.0kb upstream 6115 true Chr5: 2933347-2939461 Arabidopsis thaliana
AT5G09440 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2933347-2938346 Arabidopsis thaliana
AT5G09440 5.0kb downstream 5.0kb downstream 6115 true Chr5: 2938347-2944461 Arabidopsis thaliana
AT5G09440 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2939462-2944461 Arabidopsis thaliana
AT5G09440 10.0kb upstream 10.0kb upstream 11115 true Chr5: 2928347-2939461 Arabidopsis thaliana
AT5G09440 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2928347-2938346 Arabidopsis thaliana
AT5G09440 10.0kb downstream 10.0kb downstream 11115 true Chr5: 2938347-2949461 Arabidopsis thaliana
AT5G09440 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2939462-2949461 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122791521 5272 Eudicot View MSA
122363792 5261 Brassicaceae View MSA
123798615 5264 Brassicales-Malvales View MSA
124296226 5266 SBM View MSA
124250375 5268 Malvidae View MSA
124070844 5270 Rosid View MSA
123746881 5271 Pentapetalae View MSA
122046838 5273 Angiosperm View MSA
121351467 5274 Embryophyte View MSA
123382178 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.024       Low
cufflinks 82.305     High  
cufflinks 31.901     High  
cufflinks 63.336     High  
cufflinks 45.853     High  
cufflinks 66.725     High  

0 Strain