Gene : XBAT33 A. thaliana TAIR10
Primary Identifier:  ? AT5G07270 Defline:  (1 of 1) PTHR24128:SF13 - E3 UBIQUITIN-PROTEIN LIGASE XBAT33
Genomic Order:  662 Name:  ? AT5G07270
Secondary Identifier:  ? PAC:19665812
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G07270 0.5kb upstream 0.5kb upstream 3427 true Chr5: 2280167-2283593 Arabidopsis thaliana
AT5G07270 0.5kb upstream 0.5kb upstream 500 false Chr5: 2280167-2280666 Arabidopsis thaliana
AT5G07270 0.5kb downstream 0.5kb downstream 3427 true Chr5: 2280667-2284093 Arabidopsis thaliana
AT5G07270 0.5kb downstream 0.5kb downstream 500 false Chr5: 2283594-2284093 Arabidopsis thaliana
AT5G07270 1.0kb upstream 1.0kb upstream 3927 true Chr5: 2279667-2283593 Arabidopsis thaliana
AT5G07270 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2279667-2280666 Arabidopsis thaliana
AT5G07270 1.0kb downstream 1.0kb downstream 3927 true Chr5: 2280667-2284593 Arabidopsis thaliana
AT5G07270 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2283594-2284593 Arabidopsis thaliana
AT5G07270 2.0kb upstream 2.0kb upstream 4927 true Chr5: 2278667-2283593 Arabidopsis thaliana
AT5G07270 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2278667-2280666 Arabidopsis thaliana
AT5G07270 2.0kb downstream 2.0kb downstream 4927 true Chr5: 2280667-2285593 Arabidopsis thaliana
AT5G07270 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2283594-2285593 Arabidopsis thaliana
AT5G07270 5.0kb upstream 5.0kb upstream 7927 true Chr5: 2275667-2283593 Arabidopsis thaliana
AT5G07270 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2275667-2280666 Arabidopsis thaliana
AT5G07270 5.0kb downstream 5.0kb downstream 7927 true Chr5: 2280667-2288593 Arabidopsis thaliana
AT5G07270 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2283594-2288593 Arabidopsis thaliana
AT5G07270 10.0kb upstream 10.0kb upstream 12927 true Chr5: 2270667-2283593 Arabidopsis thaliana
AT5G07270 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2270667-2280666 Arabidopsis thaliana
AT5G07270 10.0kb downstream 10.0kb downstream 12927 true Chr5: 2280667-2293593 Arabidopsis thaliana
AT5G07270 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2283594-2293593 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369843 5261 Brassicaceae View MSA
123828156 5264 Brassicales-Malvales View MSA
124337064 5266 SBM View MSA
124237091 5268 Malvidae View MSA
124061674 5270 Rosid View MSA
123746531 5271 Pentapetalae View MSA
122792004 5272 Eudicot View MSA
122042206 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121348775 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.326       Low
cufflinks 12.971        
cufflinks 8.335        
cufflinks 14.26       High
cufflinks 8.29        
cufflinks 12.357        

0 Strain