Gene : STRS2 A. thaliana TAIR10
Primary Identifier:  ? AT5G08620 Defline:  (1 of 3) PTHR24031:SF265 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 25-RELATED
Genomic Order:  810 Name:  ? AT5G08620
Secondary Identifier:  ? PAC:19670723
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G08620 0.5kb upstream 0.5kb upstream 3704 true Chr5: 2793957-2797660 Arabidopsis thaliana
AT5G08620 0.5kb upstream 0.5kb upstream 500 false Chr5: 2793957-2794456 Arabidopsis thaliana
AT5G08620 0.5kb downstream 0.5kb downstream 3704 true Chr5: 2794457-2798160 Arabidopsis thaliana
AT5G08620 0.5kb downstream 0.5kb downstream 500 false Chr5: 2797661-2798160 Arabidopsis thaliana
AT5G08620 1.0kb upstream 1.0kb upstream 4204 true Chr5: 2793457-2797660 Arabidopsis thaliana
AT5G08620 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2793457-2794456 Arabidopsis thaliana
AT5G08620 1.0kb downstream 1.0kb downstream 4204 true Chr5: 2794457-2798660 Arabidopsis thaliana
AT5G08620 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2797661-2798660 Arabidopsis thaliana
AT5G08620 2.0kb upstream 2.0kb upstream 5204 true Chr5: 2792457-2797660 Arabidopsis thaliana
AT5G08620 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2792457-2794456 Arabidopsis thaliana
AT5G08620 2.0kb downstream 2.0kb downstream 5204 true Chr5: 2794457-2799660 Arabidopsis thaliana
AT5G08620 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2797661-2799660 Arabidopsis thaliana
AT5G08620 5.0kb upstream 5.0kb upstream 8204 true Chr5: 2789457-2797660 Arabidopsis thaliana
AT5G08620 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2789457-2794456 Arabidopsis thaliana
AT5G08620 5.0kb downstream 5.0kb downstream 8204 true Chr5: 2794457-2802660 Arabidopsis thaliana
AT5G08620 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2797661-2802660 Arabidopsis thaliana
AT5G08620 10.0kb upstream 10.0kb upstream 13204 true Chr5: 2784457-2797660 Arabidopsis thaliana
AT5G08620 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2784457-2794456 Arabidopsis thaliana
AT5G08620 10.0kb downstream 10.0kb downstream 13204 true Chr5: 2794457-2807660 Arabidopsis thaliana
AT5G08620 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2797661-2807660 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361364 5261 Brassicaceae View MSA
123798145 5264 Brassicales-Malvales View MSA
124295820 5266 SBM View MSA
124148151 5268 Malvidae View MSA
124072902 5270 Rosid View MSA
123752686 5271 Pentapetalae View MSA
122791455 5272 Eudicot View MSA
122047115 5273 Angiosperm View MSA
121350061 5274 Embryophyte View MSA
123424072 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.354        
cufflinks 14.53        
cufflinks 8.656        
cufflinks 16.936       High
cufflinks 8.079       Low
cufflinks 14.699        

0 Strain