Gene : HSC70-1 A. thaliana TAIR10
Primary Identifier:  ? AT5G02500 Defline:  (1 of 4) PTHR19375:SF232 - MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37E-RELATED
Genomic Order:  158 Name:  ? AT5G02500
Secondary Identifier:  ? PAC:19672372
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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G02500 0.5kb upstream 0.5kb upstream 3198 true Chr5: 553745-556942 Arabidopsis thaliana
AT5G02500 0.5kb upstream 0.5kb upstream 500 false Chr5: 556443-556942 Arabidopsis thaliana
AT5G02500 0.5kb downstream 0.5kb downstream 3198 true Chr5: 553245-556442 Arabidopsis thaliana
AT5G02500 0.5kb downstream 0.5kb downstream 500 false Chr5: 553245-553744 Arabidopsis thaliana
AT5G02500 1.0kb upstream 1.0kb upstream 3698 true Chr5: 553745-557442 Arabidopsis thaliana
AT5G02500 1.0kb upstream 1.0kb upstream 1000 false Chr5: 556443-557442 Arabidopsis thaliana
AT5G02500 1.0kb downstream 1.0kb downstream 3698 true Chr5: 552745-556442 Arabidopsis thaliana
AT5G02500 1.0kb downstream 1.0kb downstream 1000 false Chr5: 552745-553744 Arabidopsis thaliana
AT5G02500 2.0kb upstream 2.0kb upstream 4698 true Chr5: 553745-558442 Arabidopsis thaliana
AT5G02500 2.0kb upstream 2.0kb upstream 2000 false Chr5: 556443-558442 Arabidopsis thaliana
AT5G02500 2.0kb downstream 2.0kb downstream 4698 true Chr5: 551745-556442 Arabidopsis thaliana
AT5G02500 2.0kb downstream 2.0kb downstream 2000 false Chr5: 551745-553744 Arabidopsis thaliana
AT5G02500 5.0kb upstream 5.0kb upstream 7698 true Chr5: 553745-561442 Arabidopsis thaliana
AT5G02500 5.0kb upstream 5.0kb upstream 5000 false Chr5: 556443-561442 Arabidopsis thaliana
AT5G02500 5.0kb downstream 5.0kb downstream 7698 true Chr5: 548745-556442 Arabidopsis thaliana
AT5G02500 5.0kb downstream 5.0kb downstream 5000 false Chr5: 548745-553744 Arabidopsis thaliana
AT5G02500 10.0kb upstream 10.0kb upstream 12698 true Chr5: 553745-566442 Arabidopsis thaliana
AT5G02500 10.0kb upstream 10.0kb upstream 10000 false Chr5: 556443-566442 Arabidopsis thaliana
AT5G02500 10.0kb downstream 10.0kb downstream 12698 true Chr5: 543745-556442 Arabidopsis thaliana
AT5G02500 10.0kb downstream 10.0kb downstream 10000 false Chr5: 543745-553744 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380761 5261 Brassicaceae View MSA
123838654 5264 Brassicales-Malvales View MSA
124351260 5266 SBM View MSA
124251706 5268 Malvidae View MSA
124071606 5270 Rosid View MSA
123753199 5271 Pentapetalae View MSA
122797693 5272 Eudicot View MSA
122051630 5273 Angiosperm View MSA
121350405 5274 Embryophyte View MSA
123428541 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 474.443     High  
cufflinks 575.18     High  
cufflinks 331.078     High Low
cufflinks 641.326     High  
cufflinks 341.061     High Low
cufflinks 741.104     High High

0 Strain