Gene : PIS2 A. thaliana TAIR10
Primary Identifier:  ? AT4G38570 Defline:  (1 of 2) K00999 - CDP-diacylglycerol--inositol 3-phosphatidyltransferase (CDIPT)
Genomic Order:  3965 Name:  ? AT4G38570
Secondary Identifier:  ? PAC:19644699
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6351 Arabidopsis thaliana pathologic  
Athaliana PWY-6352 Arabidopsis thaliana pathologic  
Athaliana PWY-7625 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G38570 0.5kb upstream 0.5kb upstream 2963 true Chr4: 18031279-18034241 Arabidopsis thaliana
AT4G38570 0.5kb upstream 0.5kb upstream 500 false Chr4: 18033742-18034241 Arabidopsis thaliana
AT4G38570 0.5kb downstream 0.5kb downstream 2963 true Chr4: 18030779-18033741 Arabidopsis thaliana
AT4G38570 0.5kb downstream 0.5kb downstream 500 false Chr4: 18030779-18031278 Arabidopsis thaliana
AT4G38570 1.0kb upstream 1.0kb upstream 3463 true Chr4: 18031279-18034741 Arabidopsis thaliana
AT4G38570 1.0kb upstream 1.0kb upstream 1000 false Chr4: 18033742-18034741 Arabidopsis thaliana
AT4G38570 1.0kb downstream 1.0kb downstream 3463 true Chr4: 18030279-18033741 Arabidopsis thaliana
AT4G38570 1.0kb downstream 1.0kb downstream 1000 false Chr4: 18030279-18031278 Arabidopsis thaliana
AT4G38570 2.0kb upstream 2.0kb upstream 4463 true Chr4: 18031279-18035741 Arabidopsis thaliana
AT4G38570 2.0kb upstream 2.0kb upstream 2000 false Chr4: 18033742-18035741 Arabidopsis thaliana
AT4G38570 2.0kb downstream 2.0kb downstream 4463 true Chr4: 18029279-18033741 Arabidopsis thaliana
AT4G38570 2.0kb downstream 2.0kb downstream 2000 false Chr4: 18029279-18031278 Arabidopsis thaliana
AT4G38570 5.0kb upstream 5.0kb upstream 7463 true Chr4: 18031279-18038741 Arabidopsis thaliana
AT4G38570 5.0kb upstream 5.0kb upstream 5000 false Chr4: 18033742-18038741 Arabidopsis thaliana
AT4G38570 5.0kb downstream 5.0kb downstream 7463 true Chr4: 18026279-18033741 Arabidopsis thaliana
AT4G38570 5.0kb downstream 5.0kb downstream 5000 false Chr4: 18026279-18031278 Arabidopsis thaliana
AT4G38570 10.0kb upstream 10.0kb upstream 12463 true Chr4: 18031279-18043741 Arabidopsis thaliana
AT4G38570 10.0kb upstream 10.0kb upstream 10000 false Chr4: 18033742-18043741 Arabidopsis thaliana
AT4G38570 10.0kb downstream 10.0kb downstream 12463 true Chr4: 18021279-18033741 Arabidopsis thaliana
AT4G38570 10.0kb downstream 10.0kb downstream 10000 false Chr4: 18021279-18031278 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379142 5261 Brassicaceae View MSA
123837573 5264 Brassicales-Malvales View MSA
124322337 5266 SBM View MSA
124237971 5268 Malvidae View MSA
124074338 5270 Rosid View MSA
123738044 5271 Pentapetalae View MSA
122788491 5272 Eudicot View MSA
122046136 5273 Angiosperm View MSA
121345622 5274 Embryophyte View MSA
123428790 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.752       Low
cufflinks 5.303        
cufflinks 2.21        
cufflinks 5.867       High
cufflinks 2.37        
cufflinks 4.697        

0 Strain