Gene : AT4G38790 A. thaliana TAIR10
Defline:  (1 of 2) PTHR10585//PTHR10585:SF10 - ER LUMEN PROTEIN RETAINING RECEPTOR // ER LUMEN PROTEIN RETAINING RECEPTOR FAMILY PROTEIN-RELATED Genomic Order:  3985
Name:  ? AT4G38790 Secondary Identifier:  ? PAC:19646530
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G38790 0.5kb upstream 0.5kb upstream 2346 true Chr4: 18110861-18113206 Arabidopsis thaliana
AT4G38790 0.5kb upstream 0.5kb upstream 500 false Chr4: 18110861-18111360 Arabidopsis thaliana
AT4G38790 0.5kb downstream 0.5kb downstream 2346 true Chr4: 18111361-18113706 Arabidopsis thaliana
AT4G38790 0.5kb downstream 0.5kb downstream 500 false Chr4: 18113207-18113706 Arabidopsis thaliana
AT4G38790 1.0kb upstream 1.0kb upstream 2846 true Chr4: 18110361-18113206 Arabidopsis thaliana
AT4G38790 1.0kb upstream 1.0kb upstream 1000 false Chr4: 18110361-18111360 Arabidopsis thaliana
AT4G38790 1.0kb downstream 1.0kb downstream 2846 true Chr4: 18111361-18114206 Arabidopsis thaliana
AT4G38790 1.0kb downstream 1.0kb downstream 1000 false Chr4: 18113207-18114206 Arabidopsis thaliana
AT4G38790 2.0kb upstream 2.0kb upstream 3846 true Chr4: 18109361-18113206 Arabidopsis thaliana
AT4G38790 2.0kb upstream 2.0kb upstream 2000 false Chr4: 18109361-18111360 Arabidopsis thaliana
AT4G38790 2.0kb downstream 2.0kb downstream 3846 true Chr4: 18111361-18115206 Arabidopsis thaliana
AT4G38790 2.0kb downstream 2.0kb downstream 2000 false Chr4: 18113207-18115206 Arabidopsis thaliana
AT4G38790 5.0kb upstream 5.0kb upstream 6846 true Chr4: 18106361-18113206 Arabidopsis thaliana
AT4G38790 5.0kb upstream 5.0kb upstream 5000 false Chr4: 18106361-18111360 Arabidopsis thaliana
AT4G38790 5.0kb downstream 5.0kb downstream 6846 true Chr4: 18111361-18118206 Arabidopsis thaliana
AT4G38790 5.0kb downstream 5.0kb downstream 5000 false Chr4: 18113207-18118206 Arabidopsis thaliana
AT4G38790 10.0kb upstream 10.0kb upstream 11846 true Chr4: 18101361-18113206 Arabidopsis thaliana
AT4G38790 10.0kb upstream 10.0kb upstream 10000 false Chr4: 18101361-18111360 Arabidopsis thaliana
AT4G38790 10.0kb downstream 10.0kb downstream 11846 true Chr4: 18111361-18123206 Arabidopsis thaliana
AT4G38790 10.0kb downstream 10.0kb downstream 10000 false Chr4: 18113207-18123206 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378997 5261 Brassicaceae View MSA
123835082 5264 Brassicales-Malvales View MSA
124351182 5266 SBM View MSA
124254707 5268 Malvidae View MSA
124073908 5270 Rosid View MSA
123748008 5271 Pentapetalae View MSA
122789201 5272 Eudicot View MSA
122049823 5273 Angiosperm View MSA
121349491 5274 Embryophyte View MSA
123426417 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.463        
cufflinks 20.364        
cufflinks 11.885       Low
cufflinks 23.115        
cufflinks 13.208       Low
cufflinks 22.63        

0 Strain