Gene : GH9B18 A. thaliana TAIR10
Primary Identifier:  ? AT4G39010 Defline:  (1 of 3) K01179 - endoglucanase (E3.2.1.4)
Genomic Order:  4008 Name:  ? AT4G39010
Secondary Identifier:  ? PAC:19644660
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G39010 0.5kb upstream 0.5kb upstream 3782 true Chr4: 18175902-18179683 Arabidopsis thaliana
AT4G39010 0.5kb upstream 0.5kb upstream 500 false Chr4: 18179184-18179683 Arabidopsis thaliana
AT4G39010 0.5kb downstream 0.5kb downstream 3782 true Chr4: 18175402-18179183 Arabidopsis thaliana
AT4G39010 0.5kb downstream 0.5kb downstream 500 false Chr4: 18175402-18175901 Arabidopsis thaliana
AT4G39010 1.0kb upstream 1.0kb upstream 4282 true Chr4: 18175902-18180183 Arabidopsis thaliana
AT4G39010 1.0kb upstream 1.0kb upstream 1000 false Chr4: 18179184-18180183 Arabidopsis thaliana
AT4G39010 1.0kb downstream 1.0kb downstream 4282 true Chr4: 18174902-18179183 Arabidopsis thaliana
AT4G39010 1.0kb downstream 1.0kb downstream 1000 false Chr4: 18174902-18175901 Arabidopsis thaliana
AT4G39010 2.0kb upstream 2.0kb upstream 5282 true Chr4: 18175902-18181183 Arabidopsis thaliana
AT4G39010 2.0kb upstream 2.0kb upstream 2000 false Chr4: 18179184-18181183 Arabidopsis thaliana
AT4G39010 2.0kb downstream 2.0kb downstream 5282 true Chr4: 18173902-18179183 Arabidopsis thaliana
AT4G39010 2.0kb downstream 2.0kb downstream 2000 false Chr4: 18173902-18175901 Arabidopsis thaliana
AT4G39010 5.0kb upstream 5.0kb upstream 8282 true Chr4: 18175902-18184183 Arabidopsis thaliana
AT4G39010 5.0kb upstream 5.0kb upstream 5000 false Chr4: 18179184-18184183 Arabidopsis thaliana
AT4G39010 5.0kb downstream 5.0kb downstream 8282 true Chr4: 18170902-18179183 Arabidopsis thaliana
AT4G39010 5.0kb downstream 5.0kb downstream 5000 false Chr4: 18170902-18175901 Arabidopsis thaliana
AT4G39010 10.0kb upstream 10.0kb upstream 13282 true Chr4: 18175902-18189183 Arabidopsis thaliana
AT4G39010 10.0kb upstream 10.0kb upstream 10000 false Chr4: 18179184-18189183 Arabidopsis thaliana
AT4G39010 10.0kb downstream 10.0kb downstream 13282 true Chr4: 18165902-18179183 Arabidopsis thaliana
AT4G39010 10.0kb downstream 10.0kb downstream 10000 false Chr4: 18165902-18175901 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373286 5261 Brassicaceae View MSA
123836148 5264 Brassicales-Malvales View MSA
124342267 5266 SBM View MSA
124241895 5268 Malvidae View MSA
124074876 5270 Rosid View MSA
123753094 5271 Pentapetalae View MSA
122792910 5272 Eudicot View MSA
122045461 5273 Angiosperm View MSA
121349892 5274 Embryophyte View MSA
123381487 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.406        
cufflinks 1.421        
cufflinks 0.455        
cufflinks 0.924        
cufflinks 0.301       Low
cufflinks 1.744       High

0 Strain