Gene : CPK5 A. thaliana TAIR10
Primary Identifier:  ? AT4G35310 Defline:  (1 of 1) PTHR24349//PTHR24349:SF142 - SERINE/THREONINE-PROTEIN KINASE // CALCIUM-DEPENDENT PROTEIN KINASE 5
Genomic Order:  3620 Name:  ? AT4G35310
Secondary Identifier:  ? PAC:19645805
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G35310 0.5kb upstream 0.5kb upstream 3509 true Chr4: 16801487-16804995 Arabidopsis thaliana
AT4G35310 0.5kb upstream 0.5kb upstream 500 false Chr4: 16801487-16801986 Arabidopsis thaliana
AT4G35310 0.5kb downstream 0.5kb downstream 3509 true Chr4: 16801987-16805495 Arabidopsis thaliana
AT4G35310 0.5kb downstream 0.5kb downstream 500 false Chr4: 16804996-16805495 Arabidopsis thaliana
AT4G35310 1.0kb upstream 1.0kb upstream 4009 true Chr4: 16800987-16804995 Arabidopsis thaliana
AT4G35310 1.0kb upstream 1.0kb upstream 1000 false Chr4: 16800987-16801986 Arabidopsis thaliana
AT4G35310 1.0kb downstream 1.0kb downstream 4009 true Chr4: 16801987-16805995 Arabidopsis thaliana
AT4G35310 1.0kb downstream 1.0kb downstream 1000 false Chr4: 16804996-16805995 Arabidopsis thaliana
AT4G35310 2.0kb upstream 2.0kb upstream 5009 true Chr4: 16799987-16804995 Arabidopsis thaliana
AT4G35310 2.0kb upstream 2.0kb upstream 2000 false Chr4: 16799987-16801986 Arabidopsis thaliana
AT4G35310 2.0kb downstream 2.0kb downstream 5009 true Chr4: 16801987-16806995 Arabidopsis thaliana
AT4G35310 2.0kb downstream 2.0kb downstream 2000 false Chr4: 16804996-16806995 Arabidopsis thaliana
AT4G35310 5.0kb upstream 5.0kb upstream 8009 true Chr4: 16796987-16804995 Arabidopsis thaliana
AT4G35310 5.0kb upstream 5.0kb upstream 5000 false Chr4: 16796987-16801986 Arabidopsis thaliana
AT4G35310 5.0kb downstream 5.0kb downstream 8009 true Chr4: 16801987-16809995 Arabidopsis thaliana
AT4G35310 5.0kb downstream 5.0kb downstream 5000 false Chr4: 16804996-16809995 Arabidopsis thaliana
AT4G35310 10.0kb upstream 10.0kb upstream 13009 true Chr4: 16791987-16804995 Arabidopsis thaliana
AT4G35310 10.0kb upstream 10.0kb upstream 10000 false Chr4: 16791987-16801986 Arabidopsis thaliana
AT4G35310 10.0kb downstream 10.0kb downstream 13009 true Chr4: 16801987-16814995 Arabidopsis thaliana
AT4G35310 10.0kb downstream 10.0kb downstream 10000 false Chr4: 16804996-16814995 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378116 5261 Brassicaceae View MSA
123836645 5264 Brassicales-Malvales View MSA
124343015 5266 SBM View MSA
124247953 5268 Malvidae View MSA
124064414 5270 Rosid View MSA
123746824 5271 Pentapetalae View MSA
122786151 5272 Eudicot View MSA
122046478 5273 Angiosperm View MSA
121350946 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 91.687     High High
cufflinks 61.367     High  
cufflinks 52.695     High Low
cufflinks 61.712     High  
cufflinks 74.989     High  
cufflinks 71.547     High  

0 Strain