Gene : ALDH3I1 A. thaliana TAIR10

Primary Identifier:  ? AT4G34240 Defline:  (1 of 2) PTHR11699:SF171 - ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC
Genomic Order:  3503 Name:  ? AT4G34240
Secondary Identifier:  ? PAC:19648869

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-2724 Arabidopsis thaliana pathologic  
Athaliana PWY-6054 Arabidopsis thaliana pathologic  
Athaliana PWY66-21 Arabidopsis thaliana pathologic  
Athaliana PWY66-389 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G34240 0.5kb upstream 0.5kb upstream 3705 true Chr4: 16389120-16392824 Arabidopsis thaliana
AT4G34240 0.5kb upstream 0.5kb upstream 500 false Chr4: 16389120-16389619 Arabidopsis thaliana
AT4G34240 0.5kb downstream 0.5kb downstream 3705 true Chr4: 16389620-16393324 Arabidopsis thaliana
AT4G34240 0.5kb downstream 0.5kb downstream 500 false Chr4: 16392825-16393324 Arabidopsis thaliana
AT4G34240 1.0kb upstream 1.0kb upstream 4205 true Chr4: 16388620-16392824 Arabidopsis thaliana
AT4G34240 1.0kb upstream 1.0kb upstream 1000 false Chr4: 16388620-16389619 Arabidopsis thaliana
AT4G34240 1.0kb downstream 1.0kb downstream 4205 true Chr4: 16389620-16393824 Arabidopsis thaliana
AT4G34240 1.0kb downstream 1.0kb downstream 1000 false Chr4: 16392825-16393824 Arabidopsis thaliana
AT4G34240 2.0kb upstream 2.0kb upstream 5205 true Chr4: 16387620-16392824 Arabidopsis thaliana
AT4G34240 2.0kb upstream 2.0kb upstream 2000 false Chr4: 16387620-16389619 Arabidopsis thaliana
AT4G34240 2.0kb downstream 2.0kb downstream 5205 true Chr4: 16389620-16394824 Arabidopsis thaliana
AT4G34240 2.0kb downstream 2.0kb downstream 2000 false Chr4: 16392825-16394824 Arabidopsis thaliana
AT4G34240 5.0kb upstream 5.0kb upstream 8205 true Chr4: 16384620-16392824 Arabidopsis thaliana
AT4G34240 5.0kb upstream 5.0kb upstream 5000 false Chr4: 16384620-16389619 Arabidopsis thaliana
AT4G34240 5.0kb downstream 5.0kb downstream 8205 true Chr4: 16389620-16397824 Arabidopsis thaliana
AT4G34240 5.0kb downstream 5.0kb downstream 5000 false Chr4: 16392825-16397824 Arabidopsis thaliana
AT4G34240 10.0kb upstream 10.0kb upstream 13205 true Chr4: 16379620-16392824 Arabidopsis thaliana
AT4G34240 10.0kb upstream 10.0kb upstream 10000 false Chr4: 16379620-16389619 Arabidopsis thaliana
AT4G34240 10.0kb downstream 10.0kb downstream 13205 true Chr4: 16389620-16402824 Arabidopsis thaliana
AT4G34240 10.0kb downstream 10.0kb downstream 10000 false Chr4: 16392825-16402824 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364929 5261 Brassicaceae View MSA
123831244 5264 Brassicales-Malvales View MSA
124337798 5266 SBM View MSA
124245156 5268 Malvidae View MSA
124071959 5270 Rosid View MSA
123741483 5271 Pentapetalae View MSA
122790699 5272 Eudicot View MSA
122047593 5273 Angiosperm View MSA
121349887 5274 Embryophyte View MSA
123425420 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.085        
cufflinks 3.866        
cufflinks 13.637        
cufflinks 3.487        
cufflinks 15.209        
cufflinks 1.901       Low

0 Strain