Gene : RPN1B A. thaliana TAIR10
Primary Identifier:  ? AT4G28470 Defline:  (1 of 2) K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1)
Genomic Order:  2871 Name:  ? AT4G28470
Secondary Identifier:  ? PAC:19645981
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G28470 0.5kb upstream 0.5kb upstream 6171 true Chr4: 14066875-14073045 Arabidopsis thaliana
AT4G28470 0.5kb upstream 0.5kb upstream 500 false Chr4: 14072546-14073045 Arabidopsis thaliana
AT4G28470 0.5kb downstream 0.5kb downstream 6171 true Chr4: 14066375-14072545 Arabidopsis thaliana
AT4G28470 0.5kb downstream 0.5kb downstream 500 false Chr4: 14066375-14066874 Arabidopsis thaliana
AT4G28470 1.0kb upstream 1.0kb upstream 6671 true Chr4: 14066875-14073545 Arabidopsis thaliana
AT4G28470 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14072546-14073545 Arabidopsis thaliana
AT4G28470 1.0kb downstream 1.0kb downstream 6671 true Chr4: 14065875-14072545 Arabidopsis thaliana
AT4G28470 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14065875-14066874 Arabidopsis thaliana
AT4G28470 2.0kb upstream 2.0kb upstream 7671 true Chr4: 14066875-14074545 Arabidopsis thaliana
AT4G28470 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14072546-14074545 Arabidopsis thaliana
AT4G28470 2.0kb downstream 2.0kb downstream 7671 true Chr4: 14064875-14072545 Arabidopsis thaliana
AT4G28470 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14064875-14066874 Arabidopsis thaliana
AT4G28470 5.0kb upstream 5.0kb upstream 10671 true Chr4: 14066875-14077545 Arabidopsis thaliana
AT4G28470 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14072546-14077545 Arabidopsis thaliana
AT4G28470 5.0kb downstream 5.0kb downstream 10671 true Chr4: 14061875-14072545 Arabidopsis thaliana
AT4G28470 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14061875-14066874 Arabidopsis thaliana
AT4G28470 10.0kb upstream 10.0kb upstream 15671 true Chr4: 14066875-14082545 Arabidopsis thaliana
AT4G28470 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14072546-14082545 Arabidopsis thaliana
AT4G28470 10.0kb downstream 10.0kb downstream 15671 true Chr4: 14056875-14072545 Arabidopsis thaliana
AT4G28470 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14056875-14066874 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379635 5261 Brassicaceae View MSA
123827603 5264 Brassicales-Malvales View MSA
124341714 5266 SBM View MSA
124239194 5268 Malvidae View MSA
124062825 5270 Rosid View MSA
123743224 5271 Pentapetalae View MSA
122786983 5272 Eudicot View MSA
122042231 5273 Angiosperm View MSA
123428994 5275 Viridiplantae View MSA
121346933 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.746        
cufflinks 12.985        
cufflinks 8.611       Low
cufflinks 14.287        
cufflinks 8.674       Low
cufflinks 15.944       High

0 Strain