Gene : SNF7.1 A. thaliana TAIR10
Primary Identifier:  ? AT4G29160 Defline:  (1 of 1) PTHR22761:SF8 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 32 HOMOLOG 1-RELATED
Genomic Order:  2947 Name:  ? AT4G29160
Secondary Identifier:  ? PAC:19647288
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G29160 0.5kb upstream 0.5kb upstream 2414 true Chr4: 14380253-14382666 Arabidopsis thaliana
AT4G29160 0.5kb upstream 0.5kb upstream 500 false Chr4: 14380253-14380752 Arabidopsis thaliana
AT4G29160 0.5kb downstream 0.5kb downstream 2414 true Chr4: 14380753-14383166 Arabidopsis thaliana
AT4G29160 0.5kb downstream 0.5kb downstream 500 false Chr4: 14382667-14383166 Arabidopsis thaliana
AT4G29160 1.0kb upstream 1.0kb upstream 2914 true Chr4: 14379753-14382666 Arabidopsis thaliana
AT4G29160 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14379753-14380752 Arabidopsis thaliana
AT4G29160 1.0kb downstream 1.0kb downstream 2914 true Chr4: 14380753-14383666 Arabidopsis thaliana
AT4G29160 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14382667-14383666 Arabidopsis thaliana
AT4G29160 2.0kb upstream 2.0kb upstream 3914 true Chr4: 14378753-14382666 Arabidopsis thaliana
AT4G29160 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14378753-14380752 Arabidopsis thaliana
AT4G29160 2.0kb downstream 2.0kb downstream 3914 true Chr4: 14380753-14384666 Arabidopsis thaliana
AT4G29160 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14382667-14384666 Arabidopsis thaliana
AT4G29160 5.0kb upstream 5.0kb upstream 6914 true Chr4: 14375753-14382666 Arabidopsis thaliana
AT4G29160 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14375753-14380752 Arabidopsis thaliana
AT4G29160 5.0kb downstream 5.0kb downstream 6914 true Chr4: 14380753-14387666 Arabidopsis thaliana
AT4G29160 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14382667-14387666 Arabidopsis thaliana
AT4G29160 10.0kb upstream 10.0kb upstream 11914 true Chr4: 14370753-14382666 Arabidopsis thaliana
AT4G29160 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14370753-14380752 Arabidopsis thaliana
AT4G29160 10.0kb downstream 10.0kb downstream 11914 true Chr4: 14380753-14392666 Arabidopsis thaliana
AT4G29160 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14382667-14392666 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375730 5261 Brassicaceae View MSA
123840379 5264 Brassicales-Malvales View MSA
124340180 5266 SBM View MSA
124241353 5268 Malvidae View MSA
124071196 5270 Rosid View MSA
123751251 5271 Pentapetalae View MSA
122786571 5272 Eudicot View MSA
122048548 5273 Angiosperm View MSA
121350329 5274 Embryophyte View MSA
123426511 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.697        
cufflinks 24.034       High
cufflinks 15.036       Low
cufflinks 21.458        
cufflinks 16.961        
cufflinks 23.133        

0 Strain