Gene : CRF4 A. thaliana TAIR10
Primary Identifier:  ? AT4G27950 Defline:  (1 of 8) PTHR31194//PTHR31194:SF0 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF3-RELATED
Genomic Order:  2810 Name:  ? AT4G27950
Secondary Identifier:  ? PAC:19644450
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G27950 0.5kb upstream 0.5kb upstream 1791 true Chr4: 13909569-13911359 Arabidopsis thaliana
AT4G27950 0.5kb upstream 0.5kb upstream 500 false Chr4: 13910860-13911359 Arabidopsis thaliana
AT4G27950 0.5kb downstream 0.5kb downstream 1791 true Chr4: 13909069-13910859 Arabidopsis thaliana
AT4G27950 0.5kb downstream 0.5kb downstream 500 false Chr4: 13909069-13909568 Arabidopsis thaliana
AT4G27950 1.0kb upstream 1.0kb upstream 2291 true Chr4: 13909569-13911859 Arabidopsis thaliana
AT4G27950 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13910860-13911859 Arabidopsis thaliana
AT4G27950 1.0kb downstream 1.0kb downstream 2291 true Chr4: 13908569-13910859 Arabidopsis thaliana
AT4G27950 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13908569-13909568 Arabidopsis thaliana
AT4G27950 2.0kb upstream 2.0kb upstream 3291 true Chr4: 13909569-13912859 Arabidopsis thaliana
AT4G27950 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13910860-13912859 Arabidopsis thaliana
AT4G27950 2.0kb downstream 2.0kb downstream 3291 true Chr4: 13907569-13910859 Arabidopsis thaliana
AT4G27950 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13907569-13909568 Arabidopsis thaliana
AT4G27950 5.0kb upstream 5.0kb upstream 6291 true Chr4: 13909569-13915859 Arabidopsis thaliana
AT4G27950 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13910860-13915859 Arabidopsis thaliana
AT4G27950 5.0kb downstream 5.0kb downstream 6291 true Chr4: 13904569-13910859 Arabidopsis thaliana
AT4G27950 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13904569-13909568 Arabidopsis thaliana
AT4G27950 10.0kb upstream 10.0kb upstream 11291 true Chr4: 13909569-13920859 Arabidopsis thaliana
AT4G27950 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13910860-13920859 Arabidopsis thaliana
AT4G27950 10.0kb downstream 10.0kb downstream 11291 true Chr4: 13899569-13910859 Arabidopsis thaliana
AT4G27950 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13899569-13909568 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376336 5261 Brassicaceae View MSA
123838612 5264 Brassicales-Malvales View MSA
124339281 5266 SBM View MSA
124251372 5268 Malvidae View MSA
124071112 5270 Rosid View MSA
123744943 5271 Pentapetalae View MSA
122797737 5272 Eudicot View MSA
122048577 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.141       Low
cufflinks 4.691        
cufflinks 1.969        
cufflinks 7.576       High
cufflinks 2.14        
cufflinks 5.519        

0 Strain