Gene : AT4G26220 A. thaliana TAIR10
Defline:  (1 of 1) 2.1.1.104//2.1.1.68 - Caffeoyl-CoA O-methyltransferase / Trans-caffeoyl-CoA 3-O-methyltransferase // Caffeate O-methyltransferase Genomic Order:  2625
Name:  ? AT4G26220 Secondary Identifier:  ? PAC:19644343
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Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-1121 Arabidopsis thaliana pathologic  
Athaliana PWY-2181 Arabidopsis thaliana pathologic  
Athaliana PWY-361 Arabidopsis thaliana pathologic  
Athaliana PWY-5168 Arabidopsis thaliana pathologic  
Athaliana PWY-6039 Arabidopsis thaliana pathologic  
Athaliana PWY-7186 Arabidopsis thaliana pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G26220 0.5kb upstream 0.5kb upstream 2248 true Chr4: 13283076-13285323 Arabidopsis thaliana
AT4G26220 0.5kb upstream 0.5kb upstream 500 false Chr4: 13283076-13283575 Arabidopsis thaliana
AT4G26220 0.5kb downstream 0.5kb downstream 2248 true Chr4: 13283576-13285823 Arabidopsis thaliana
AT4G26220 0.5kb downstream 0.5kb downstream 500 false Chr4: 13285324-13285823 Arabidopsis thaliana
AT4G26220 1.0kb upstream 1.0kb upstream 2748 true Chr4: 13282576-13285323 Arabidopsis thaliana
AT4G26220 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13282576-13283575 Arabidopsis thaliana
AT4G26220 1.0kb downstream 1.0kb downstream 2748 true Chr4: 13283576-13286323 Arabidopsis thaliana
AT4G26220 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13285324-13286323 Arabidopsis thaliana
AT4G26220 2.0kb upstream 2.0kb upstream 3748 true Chr4: 13281576-13285323 Arabidopsis thaliana
AT4G26220 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13281576-13283575 Arabidopsis thaliana
AT4G26220 2.0kb downstream 2.0kb downstream 3748 true Chr4: 13283576-13287323 Arabidopsis thaliana
AT4G26220 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13285324-13287323 Arabidopsis thaliana
AT4G26220 5.0kb upstream 5.0kb upstream 6748 true Chr4: 13278576-13285323 Arabidopsis thaliana
AT4G26220 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13278576-13283575 Arabidopsis thaliana
AT4G26220 5.0kb downstream 5.0kb downstream 6748 true Chr4: 13283576-13290323 Arabidopsis thaliana
AT4G26220 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13285324-13290323 Arabidopsis thaliana
AT4G26220 10.0kb upstream 10.0kb upstream 11748 true Chr4: 13273576-13285323 Arabidopsis thaliana
AT4G26220 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13273576-13283575 Arabidopsis thaliana
AT4G26220 10.0kb downstream 10.0kb downstream 11748 true Chr4: 13283576-13295323 Arabidopsis thaliana
AT4G26220 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13285324-13295323 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367701 5261 Brassicaceae View MSA
123831985 5264 Brassicales-Malvales View MSA
124339919 5266 SBM View MSA
124244563 5268 Malvidae View MSA
124070229 5270 Rosid View MSA
123751667 5271 Pentapetalae View MSA
122774127 5272 Eudicot View MSA
122050348 5273 Angiosperm View MSA
121311864 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.292        
cufflinks 9.934        
cufflinks 0.245     Low  
cufflinks 16.76       High
cufflinks 0.173     Low Low
cufflinks 10.663        

0 Strain