Gene : ATR1 A. thaliana TAIR10
Primary Identifier:  ? AT4G24520 Defline:  (1 of 1) PTHR19384:SF85 - NADPH--CYTOCHROME P450 REDUCTASE 1
Genomic Order:  2441 Name:  ? AT4G24520
Secondary Identifier:  ? PAC:19648469
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G24520 0.5kb upstream 0.5kb upstream 5139 true Chr4: 12662561-12667699 Arabidopsis thaliana
AT4G24520 0.5kb upstream 0.5kb upstream 500 false Chr4: 12667200-12667699 Arabidopsis thaliana
AT4G24520 0.5kb downstream 0.5kb downstream 5139 true Chr4: 12662061-12667199 Arabidopsis thaliana
AT4G24520 0.5kb downstream 0.5kb downstream 500 false Chr4: 12662061-12662560 Arabidopsis thaliana
AT4G24520 1.0kb upstream 1.0kb upstream 5639 true Chr4: 12662561-12668199 Arabidopsis thaliana
AT4G24520 1.0kb upstream 1.0kb upstream 1000 false Chr4: 12667200-12668199 Arabidopsis thaliana
AT4G24520 1.0kb downstream 1.0kb downstream 5639 true Chr4: 12661561-12667199 Arabidopsis thaliana
AT4G24520 1.0kb downstream 1.0kb downstream 1000 false Chr4: 12661561-12662560 Arabidopsis thaliana
AT4G24520 2.0kb upstream 2.0kb upstream 6639 true Chr4: 12662561-12669199 Arabidopsis thaliana
AT4G24520 2.0kb upstream 2.0kb upstream 2000 false Chr4: 12667200-12669199 Arabidopsis thaliana
AT4G24520 2.0kb downstream 2.0kb downstream 6639 true Chr4: 12660561-12667199 Arabidopsis thaliana
AT4G24520 2.0kb downstream 2.0kb downstream 2000 false Chr4: 12660561-12662560 Arabidopsis thaliana
AT4G24520 5.0kb upstream 5.0kb upstream 9639 true Chr4: 12662561-12672199 Arabidopsis thaliana
AT4G24520 5.0kb upstream 5.0kb upstream 5000 false Chr4: 12667200-12672199 Arabidopsis thaliana
AT4G24520 5.0kb downstream 5.0kb downstream 9639 true Chr4: 12657561-12667199 Arabidopsis thaliana
AT4G24520 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12657561-12662560 Arabidopsis thaliana
AT4G24520 10.0kb upstream 10.0kb upstream 14639 true Chr4: 12662561-12677199 Arabidopsis thaliana
AT4G24520 10.0kb upstream 10.0kb upstream 10000 false Chr4: 12667200-12677199 Arabidopsis thaliana
AT4G24520 10.0kb downstream 10.0kb downstream 14639 true Chr4: 12652561-12667199 Arabidopsis thaliana
AT4G24520 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12652561-12662560 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360869 5261 Brassicaceae View MSA
123836567 5264 Brassicales-Malvales View MSA
124341516 5266 SBM View MSA
124239797 5268 Malvidae View MSA
124067832 5270 Rosid View MSA
123749392 5271 Pentapetalae View MSA
122793880 5272 Eudicot View MSA
122046959 5273 Angiosperm View MSA
121344462 5274 Embryophyte View MSA
123424007 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.276        
cufflinks 31.78     High High
cufflinks 17.554        
cufflinks 31.557     High High
cufflinks 18.303        
cufflinks 25.694        

0 Strain