Gene : AT4G21065 A. thaliana TAIR10
Defline:  (1 of 61) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  2055
Name:  ? AT4G21065 Secondary Identifier:  ? PAC:19646056
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G21065 0.5kb upstream 0.5kb upstream 2354 true Chr4: 11245454-11247807 Arabidopsis thaliana
AT4G21065 0.5kb upstream 0.5kb upstream 500 false Chr4: 11245454-11245953 Arabidopsis thaliana
AT4G21065 0.5kb downstream 0.5kb downstream 2354 true Chr4: 11245954-11248307 Arabidopsis thaliana
AT4G21065 0.5kb downstream 0.5kb downstream 500 false Chr4: 11247808-11248307 Arabidopsis thaliana
AT4G21065 1.0kb upstream 1.0kb upstream 2854 true Chr4: 11244954-11247807 Arabidopsis thaliana
AT4G21065 1.0kb upstream 1.0kb upstream 1000 false Chr4: 11244954-11245953 Arabidopsis thaliana
AT4G21065 1.0kb downstream 1.0kb downstream 2854 true Chr4: 11245954-11248807 Arabidopsis thaliana
AT4G21065 1.0kb downstream 1.0kb downstream 1000 false Chr4: 11247808-11248807 Arabidopsis thaliana
AT4G21065 2.0kb upstream 2.0kb upstream 3854 true Chr4: 11243954-11247807 Arabidopsis thaliana
AT4G21065 2.0kb upstream 2.0kb upstream 2000 false Chr4: 11243954-11245953 Arabidopsis thaliana
AT4G21065 2.0kb downstream 2.0kb downstream 3854 true Chr4: 11245954-11249807 Arabidopsis thaliana
AT4G21065 2.0kb downstream 2.0kb downstream 2000 false Chr4: 11247808-11249807 Arabidopsis thaliana
AT4G21065 5.0kb upstream 5.0kb upstream 6854 true Chr4: 11240954-11247807 Arabidopsis thaliana
AT4G21065 5.0kb upstream 5.0kb upstream 5000 false Chr4: 11240954-11245953 Arabidopsis thaliana
AT4G21065 5.0kb downstream 5.0kb downstream 6854 true Chr4: 11245954-11252807 Arabidopsis thaliana
AT4G21065 5.0kb downstream 5.0kb downstream 5000 false Chr4: 11247808-11252807 Arabidopsis thaliana
AT4G21065 10.0kb upstream 10.0kb upstream 11854 true Chr4: 11235954-11247807 Arabidopsis thaliana
AT4G21065 10.0kb upstream 10.0kb upstream 10000 false Chr4: 11235954-11245953 Arabidopsis thaliana
AT4G21065 10.0kb downstream 10.0kb downstream 11854 true Chr4: 11245954-11257807 Arabidopsis thaliana
AT4G21065 10.0kb downstream 10.0kb downstream 10000 false Chr4: 11247808-11257807 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377914 5261 Brassicaceae View MSA
123841181 5264 Brassicales-Malvales View MSA
124347410 5266 SBM View MSA
124245481 5268 Malvidae View MSA
124072779 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.619        
cufflinks 0.803        
cufflinks 0.522        
cufflinks 0.818        
cufflinks 0.347       Low
cufflinks 0.726        

0 Strain