Gene : AT4G08900 A. thaliana TAIR10
Defline:  (1 of 2) 3.5.3.1 - Arginase / Canavanase Genomic Order:  705
Name:  ? AT4G08900 Secondary Identifier:  ? PAC:19646298
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana ARGASEDEG-PWY Arabidopsis thaliana pathologic  
Athaliana ARG-PRO-PWY Arabidopsis thaliana pathologic  
Athaliana CITRULBIO-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-4984 Arabidopsis thaliana pathologic  
Athaliana PWY-6922 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G08900 0.5kb upstream 0.5kb upstream 2500 true Chr4: 5702847-5705346 Arabidopsis thaliana
AT4G08900 0.5kb upstream 0.5kb upstream 500 false Chr4: 5702847-5703346 Arabidopsis thaliana
AT4G08900 0.5kb downstream 0.5kb downstream 2500 true Chr4: 5703347-5705846 Arabidopsis thaliana
AT4G08900 0.5kb downstream 0.5kb downstream 500 false Chr4: 5705347-5705846 Arabidopsis thaliana
AT4G08900 1.0kb upstream 1.0kb upstream 3000 true Chr4: 5702347-5705346 Arabidopsis thaliana
AT4G08900 1.0kb upstream 1.0kb upstream 1000 false Chr4: 5702347-5703346 Arabidopsis thaliana
AT4G08900 1.0kb downstream 1.0kb downstream 3000 true Chr4: 5703347-5706346 Arabidopsis thaliana
AT4G08900 1.0kb downstream 1.0kb downstream 1000 false Chr4: 5705347-5706346 Arabidopsis thaliana
AT4G08900 2.0kb upstream 2.0kb upstream 4000 true Chr4: 5701347-5705346 Arabidopsis thaliana
AT4G08900 2.0kb upstream 2.0kb upstream 2000 false Chr4: 5701347-5703346 Arabidopsis thaliana
AT4G08900 2.0kb downstream 2.0kb downstream 4000 true Chr4: 5703347-5707346 Arabidopsis thaliana
AT4G08900 2.0kb downstream 2.0kb downstream 2000 false Chr4: 5705347-5707346 Arabidopsis thaliana
AT4G08900 5.0kb upstream 5.0kb upstream 7000 true Chr4: 5698347-5705346 Arabidopsis thaliana
AT4G08900 5.0kb upstream 5.0kb upstream 5000 false Chr4: 5698347-5703346 Arabidopsis thaliana
AT4G08900 5.0kb downstream 5.0kb downstream 7000 true Chr4: 5703347-5710346 Arabidopsis thaliana
AT4G08900 5.0kb downstream 5.0kb downstream 5000 false Chr4: 5705347-5710346 Arabidopsis thaliana
AT4G08900 10.0kb upstream 10.0kb upstream 12000 true Chr4: 5693347-5705346 Arabidopsis thaliana
AT4G08900 10.0kb upstream 10.0kb upstream 10000 false Chr4: 5693347-5703346 Arabidopsis thaliana
AT4G08900 10.0kb downstream 10.0kb downstream 12000 true Chr4: 5703347-5715346 Arabidopsis thaliana
AT4G08900 10.0kb downstream 10.0kb downstream 10000 false Chr4: 5705347-5715346 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373224 5261 Brassicaceae View MSA
123739386 5271 Pentapetalae View MSA
123834890 5264 Brassicales-Malvales View MSA
124339132 5266 SBM View MSA
124250048 5268 Malvidae View MSA
124064043 5270 Rosid View MSA
122786863 5272 Eudicot View MSA
122046910 5273 Angiosperm View MSA
121347074 5274 Embryophyte View MSA
123428330 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.013       Low
cufflinks 14.26        
cufflinks 12.63        
cufflinks 13.966        
cufflinks 14.832       High
cufflinks 12.65        

0 Strain