Gene : CPK4 A. thaliana TAIR10
Primary Identifier:  ? AT4G09570 Defline:  (1 of 3) PTHR24349//PTHR24349:SF166 - SERINE/THREONINE-PROTEIN KINASE // CALCIUM-DEPENDENT PROTEIN KINASE 11-RELATED
Genomic Order:  767 Name:  ? AT4G09570
Secondary Identifier:  ? PAC:19647895
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G09570 0.5kb upstream 0.5kb upstream 3319 true Chr4: 6049017-6052335 Arabidopsis thaliana
AT4G09570 0.5kb upstream 0.5kb upstream 500 false Chr4: 6049017-6049516 Arabidopsis thaliana
AT4G09570 0.5kb downstream 0.5kb downstream 3319 true Chr4: 6049517-6052835 Arabidopsis thaliana
AT4G09570 0.5kb downstream 0.5kb downstream 500 false Chr4: 6052336-6052835 Arabidopsis thaliana
AT4G09570 1.0kb upstream 1.0kb upstream 3819 true Chr4: 6048517-6052335 Arabidopsis thaliana
AT4G09570 1.0kb upstream 1.0kb upstream 1000 false Chr4: 6048517-6049516 Arabidopsis thaliana
AT4G09570 1.0kb downstream 1.0kb downstream 3819 true Chr4: 6049517-6053335 Arabidopsis thaliana
AT4G09570 1.0kb downstream 1.0kb downstream 1000 false Chr4: 6052336-6053335 Arabidopsis thaliana
AT4G09570 2.0kb upstream 2.0kb upstream 4819 true Chr4: 6047517-6052335 Arabidopsis thaliana
AT4G09570 2.0kb upstream 2.0kb upstream 2000 false Chr4: 6047517-6049516 Arabidopsis thaliana
AT4G09570 2.0kb downstream 2.0kb downstream 4819 true Chr4: 6049517-6054335 Arabidopsis thaliana
AT4G09570 2.0kb downstream 2.0kb downstream 2000 false Chr4: 6052336-6054335 Arabidopsis thaliana
AT4G09570 5.0kb upstream 5.0kb upstream 7819 true Chr4: 6044517-6052335 Arabidopsis thaliana
AT4G09570 5.0kb upstream 5.0kb upstream 5000 false Chr4: 6044517-6049516 Arabidopsis thaliana
AT4G09570 5.0kb downstream 5.0kb downstream 7819 true Chr4: 6049517-6057335 Arabidopsis thaliana
AT4G09570 5.0kb downstream 5.0kb downstream 5000 false Chr4: 6052336-6057335 Arabidopsis thaliana
AT4G09570 10.0kb upstream 10.0kb upstream 12819 true Chr4: 6039517-6052335 Arabidopsis thaliana
AT4G09570 10.0kb upstream 10.0kb upstream 10000 false Chr4: 6039517-6049516 Arabidopsis thaliana
AT4G09570 10.0kb downstream 10.0kb downstream 12819 true Chr4: 6049517-6062335 Arabidopsis thaliana
AT4G09570 10.0kb downstream 10.0kb downstream 10000 false Chr4: 6052336-6062335 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361593 5261 Brassicaceae View MSA
123839177 5264 Brassicales-Malvales View MSA
124341928 5266 SBM View MSA
124252958 5268 Malvidae View MSA
124069708 5270 Rosid View MSA
123741053 5271 Pentapetalae View MSA
122787584 5272 Eudicot View MSA
122047311 5273 Angiosperm View MSA
121310726 5274 Embryophyte View MSA
123427978 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.578       High
cufflinks 14.651        
cufflinks 16.948        
cufflinks 12.919       Low
cufflinks 17.049        
cufflinks 18.863        

0 Strain