Gene : STS A. thaliana TAIR10
Primary Identifier:  ? AT4G01970 Defline:  (1 of 1) K06611 - stachyose synthetase (E2.4.1.67)
Genomic Order:  232 Name:  ? AT4G01970
Secondary Identifier:  ? PAC:19645166
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5337 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G01970 0.5kb upstream 0.5kb upstream 3587 true Chr4: 853922-857508 Arabidopsis thaliana
AT4G01970 0.5kb upstream 0.5kb upstream 500 false Chr4: 857009-857508 Arabidopsis thaliana
AT4G01970 0.5kb downstream 0.5kb downstream 3587 true Chr4: 853422-857008 Arabidopsis thaliana
AT4G01970 0.5kb downstream 0.5kb downstream 500 false Chr4: 853422-853921 Arabidopsis thaliana
AT4G01970 1.0kb upstream 1.0kb upstream 4087 true Chr4: 853922-858008 Arabidopsis thaliana
AT4G01970 1.0kb upstream 1.0kb upstream 1000 false Chr4: 857009-858008 Arabidopsis thaliana
AT4G01970 1.0kb downstream 1.0kb downstream 4087 true Chr4: 852922-857008 Arabidopsis thaliana
AT4G01970 1.0kb downstream 1.0kb downstream 1000 false Chr4: 852922-853921 Arabidopsis thaliana
AT4G01970 2.0kb upstream 2.0kb upstream 5087 true Chr4: 853922-859008 Arabidopsis thaliana
AT4G01970 2.0kb upstream 2.0kb upstream 2000 false Chr4: 857009-859008 Arabidopsis thaliana
AT4G01970 2.0kb downstream 2.0kb downstream 5087 true Chr4: 851922-857008 Arabidopsis thaliana
AT4G01970 2.0kb downstream 2.0kb downstream 2000 false Chr4: 851922-853921 Arabidopsis thaliana
AT4G01970 5.0kb upstream 5.0kb upstream 8087 true Chr4: 853922-862008 Arabidopsis thaliana
AT4G01970 5.0kb upstream 5.0kb upstream 5000 false Chr4: 857009-862008 Arabidopsis thaliana
AT4G01970 5.0kb downstream 5.0kb downstream 8087 true Chr4: 848922-857008 Arabidopsis thaliana
AT4G01970 5.0kb downstream 5.0kb downstream 5000 false Chr4: 848922-853921 Arabidopsis thaliana
AT4G01970 10.0kb upstream 10.0kb upstream 13087 true Chr4: 853922-867008 Arabidopsis thaliana
AT4G01970 10.0kb upstream 10.0kb upstream 10000 false Chr4: 857009-867008 Arabidopsis thaliana
AT4G01970 10.0kb downstream 10.0kb downstream 13087 true Chr4: 843922-857008 Arabidopsis thaliana
AT4G01970 10.0kb downstream 10.0kb downstream 10000 false Chr4: 843922-853921 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369849 5261 Brassicaceae View MSA
123828630 5264 Brassicales-Malvales View MSA
124338541 5266 SBM View MSA
124242487 5268 Malvidae View MSA
124064918 5270 Rosid View MSA
123736450 5271 Pentapetalae View MSA
122785743 5272 Eudicot View MSA
122041607 5273 Angiosperm View MSA
123429020 5275 Viridiplantae View MSA
121309869 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.042     Low  
cufflinks 0.327     Low  
cufflinks 0.026     Low Low
cufflinks 0.901       High
cufflinks 0.049     Low  
cufflinks 0.255     Low  

0 Strain