Gene : AT4G00238 A. thaliana TAIR10
Defline:  (1 of 17) PTHR31662//PTHR31662:SF1 - FAMILY NOT NAMED // A_IG002N01.32 PROTEIN-RELATED Genomic Order:  30
Name:  ? AT4G00238 Secondary Identifier:  ? PAC:19645287
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G00238 0.5kb upstream 0.5kb upstream 1895 true Chr4: 103823-105717 Arabidopsis thaliana
AT4G00238 0.5kb upstream 0.5kb upstream 500 false Chr4: 105218-105717 Arabidopsis thaliana
AT4G00238 0.5kb downstream 0.5kb downstream 1895 true Chr4: 103323-105217 Arabidopsis thaliana
AT4G00238 0.5kb downstream 0.5kb downstream 500 false Chr4: 103323-103822 Arabidopsis thaliana
AT4G00238 1.0kb upstream 1.0kb upstream 2395 true Chr4: 103823-106217 Arabidopsis thaliana
AT4G00238 1.0kb upstream 1.0kb upstream 1000 false Chr4: 105218-106217 Arabidopsis thaliana
AT4G00238 1.0kb downstream 1.0kb downstream 2395 true Chr4: 102823-105217 Arabidopsis thaliana
AT4G00238 1.0kb downstream 1.0kb downstream 1000 false Chr4: 102823-103822 Arabidopsis thaliana
AT4G00238 2.0kb upstream 2.0kb upstream 3395 true Chr4: 103823-107217 Arabidopsis thaliana
AT4G00238 2.0kb upstream 2.0kb upstream 2000 false Chr4: 105218-107217 Arabidopsis thaliana
AT4G00238 2.0kb downstream 2.0kb downstream 3395 true Chr4: 101823-105217 Arabidopsis thaliana
AT4G00238 2.0kb downstream 2.0kb downstream 2000 false Chr4: 101823-103822 Arabidopsis thaliana
AT4G00238 5.0kb upstream 5.0kb upstream 6395 true Chr4: 103823-110217 Arabidopsis thaliana
AT4G00238 5.0kb upstream 5.0kb upstream 5000 false Chr4: 105218-110217 Arabidopsis thaliana
AT4G00238 5.0kb downstream 5.0kb downstream 6395 true Chr4: 98823-105217 Arabidopsis thaliana
AT4G00238 5.0kb downstream 5.0kb downstream 5000 false Chr4: 98823-103822 Arabidopsis thaliana
AT4G00238 10.0kb upstream 10.0kb upstream 11395 true Chr4: 103823-115217 Arabidopsis thaliana
AT4G00238 10.0kb upstream 10.0kb upstream 10000 false Chr4: 105218-115217 Arabidopsis thaliana
AT4G00238 10.0kb downstream 10.0kb downstream 11395 true Chr4: 93823-105217 Arabidopsis thaliana
AT4G00238 10.0kb downstream 10.0kb downstream 10000 false Chr4: 93823-103822 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381926 5261 Brassicaceae View MSA
123803543 5264 Brassicales-Malvales View MSA
124300643 5266 SBM View MSA
124151780 5268 Malvidae View MSA
124072235 5270 Rosid View MSA
123751469 5271 Pentapetalae View MSA
122797914 5272 Eudicot View MSA
122051487 5273 Angiosperm View MSA
121348911 5274 Embryophyte View MSA
123381074 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.094        
cufflinks 16.124        
cufflinks 8.865        
cufflinks 18.72       High
cufflinks 7.244       Low
cufflinks 16.875        

0 Strain