Gene : AT4G00270 A. thaliana TAIR10
Defline:  (1 of 17) PTHR31662//PTHR31662:SF1 - FAMILY NOT NAMED // A_IG002N01.32 PROTEIN-RELATED Genomic Order:  34
Name:  ? AT4G00270 Secondary Identifier:  ? PAC:19649018
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G00270 0.5kb upstream 0.5kb upstream 1926 true Chr4: 117152-119077 Arabidopsis thaliana
AT4G00270 0.5kb upstream 0.5kb upstream 500 false Chr4: 118578-119077 Arabidopsis thaliana
AT4G00270 0.5kb downstream 0.5kb downstream 1926 true Chr4: 116652-118577 Arabidopsis thaliana
AT4G00270 0.5kb downstream 0.5kb downstream 500 false Chr4: 116652-117151 Arabidopsis thaliana
AT4G00270 1.0kb upstream 1.0kb upstream 2426 true Chr4: 117152-119577 Arabidopsis thaliana
AT4G00270 1.0kb upstream 1.0kb upstream 1000 false Chr4: 118578-119577 Arabidopsis thaliana
AT4G00270 1.0kb downstream 1.0kb downstream 2426 true Chr4: 116152-118577 Arabidopsis thaliana
AT4G00270 1.0kb downstream 1.0kb downstream 1000 false Chr4: 116152-117151 Arabidopsis thaliana
AT4G00270 2.0kb upstream 2.0kb upstream 3426 true Chr4: 117152-120577 Arabidopsis thaliana
AT4G00270 2.0kb upstream 2.0kb upstream 2000 false Chr4: 118578-120577 Arabidopsis thaliana
AT4G00270 2.0kb downstream 2.0kb downstream 3426 true Chr4: 115152-118577 Arabidopsis thaliana
AT4G00270 2.0kb downstream 2.0kb downstream 2000 false Chr4: 115152-117151 Arabidopsis thaliana
AT4G00270 5.0kb upstream 5.0kb upstream 6426 true Chr4: 117152-123577 Arabidopsis thaliana
AT4G00270 5.0kb upstream 5.0kb upstream 5000 false Chr4: 118578-123577 Arabidopsis thaliana
AT4G00270 5.0kb downstream 5.0kb downstream 6426 true Chr4: 112152-118577 Arabidopsis thaliana
AT4G00270 5.0kb downstream 5.0kb downstream 5000 false Chr4: 112152-117151 Arabidopsis thaliana
AT4G00270 10.0kb upstream 10.0kb upstream 11426 true Chr4: 117152-128577 Arabidopsis thaliana
AT4G00270 10.0kb upstream 10.0kb upstream 10000 false Chr4: 118578-128577 Arabidopsis thaliana
AT4G00270 10.0kb downstream 10.0kb downstream 11426 true Chr4: 107152-118577 Arabidopsis thaliana
AT4G00270 10.0kb downstream 10.0kb downstream 10000 false Chr4: 107152-117151 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379352 5261 Brassicaceae View MSA
123802222 5264 Brassicales-Malvales View MSA
124350369 5266 SBM View MSA
124252419 5268 Malvidae View MSA
124072235 5270 Rosid View MSA
123751469 5271 Pentapetalae View MSA
122797914 5272 Eudicot View MSA
122051487 5273 Angiosperm View MSA
121348911 5274 Embryophyte View MSA
123381074 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.058       High
cufflinks 16.968        
cufflinks 15.164        
cufflinks 19.514        
cufflinks 14.903        
cufflinks 16.261        

0 Strain