Gene : AT4G00390 A. thaliana TAIR10
Defline:  (1 of 20) PF04504 - Protein of unknown function, DUF573 (DUF573) Genomic Order:  51
Name:  ? AT4G00390 Secondary Identifier:  ? PAC:19644769
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G00390 0.5kb upstream 0.5kb upstream 1847 true Chr4: 171497-173343 Arabidopsis thaliana
AT4G00390 0.5kb upstream 0.5kb upstream 500 false Chr4: 172844-173343 Arabidopsis thaliana
AT4G00390 0.5kb downstream 0.5kb downstream 1847 true Chr4: 170997-172843 Arabidopsis thaliana
AT4G00390 0.5kb downstream 0.5kb downstream 500 false Chr4: 170997-171496 Arabidopsis thaliana
AT4G00390 1.0kb upstream 1.0kb upstream 2347 true Chr4: 171497-173843 Arabidopsis thaliana
AT4G00390 1.0kb upstream 1.0kb upstream 1000 false Chr4: 172844-173843 Arabidopsis thaliana
AT4G00390 1.0kb downstream 1.0kb downstream 2347 true Chr4: 170497-172843 Arabidopsis thaliana
AT4G00390 1.0kb downstream 1.0kb downstream 1000 false Chr4: 170497-171496 Arabidopsis thaliana
AT4G00390 2.0kb upstream 2.0kb upstream 3347 true Chr4: 171497-174843 Arabidopsis thaliana
AT4G00390 2.0kb upstream 2.0kb upstream 2000 false Chr4: 172844-174843 Arabidopsis thaliana
AT4G00390 2.0kb downstream 2.0kb downstream 3347 true Chr4: 169497-172843 Arabidopsis thaliana
AT4G00390 2.0kb downstream 2.0kb downstream 2000 false Chr4: 169497-171496 Arabidopsis thaliana
AT4G00390 5.0kb upstream 5.0kb upstream 6347 true Chr4: 171497-177843 Arabidopsis thaliana
AT4G00390 5.0kb upstream 5.0kb upstream 5000 false Chr4: 172844-177843 Arabidopsis thaliana
AT4G00390 5.0kb downstream 5.0kb downstream 6347 true Chr4: 166497-172843 Arabidopsis thaliana
AT4G00390 5.0kb downstream 5.0kb downstream 5000 false Chr4: 166497-171496 Arabidopsis thaliana
AT4G00390 10.0kb upstream 10.0kb upstream 11347 true Chr4: 171497-182843 Arabidopsis thaliana
AT4G00390 10.0kb upstream 10.0kb upstream 10000 false Chr4: 172844-182843 Arabidopsis thaliana
AT4G00390 10.0kb downstream 10.0kb downstream 11347 true Chr4: 161497-172843 Arabidopsis thaliana
AT4G00390 10.0kb downstream 10.0kb downstream 10000 false Chr4: 161497-171496 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381976 5261 Brassicaceae View MSA
123803576 5264 Brassicales-Malvales View MSA
124300674 5266 SBM View MSA
124252419 5268 Malvidae View MSA
124072235 5270 Rosid View MSA
123751469 5271 Pentapetalae View MSA
122797914 5272 Eudicot View MSA
122051487 5273 Angiosperm View MSA
121348911 5274 Embryophyte View MSA
123381074 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.163     Low  
cufflinks 0.089     Low Low
cufflinks 0.182     Low  
cufflinks 0.25     Low  
cufflinks 0.303       High
cufflinks 0.129     Low  

0 Strain