Gene : AT3G60680 A. thaliana TAIR10
Defline:  (1 of 12) PF04859 - Plant protein of unknown function (DUF641) (DUF641) Genomic Order:  5125
Name:  ? AT3G60680 Secondary Identifier:  ? PAC:19661878
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G60680 0.5kb upstream 0.5kb upstream 2583 true Chr3: 22429460-22432042 Arabidopsis thaliana
AT3G60680 0.5kb upstream 0.5kb upstream 500 false Chr3: 22429460-22429959 Arabidopsis thaliana
AT3G60680 0.5kb downstream 0.5kb downstream 2583 true Chr3: 22429960-22432542 Arabidopsis thaliana
AT3G60680 0.5kb downstream 0.5kb downstream 500 false Chr3: 22432043-22432542 Arabidopsis thaliana
AT3G60680 1.0kb upstream 1.0kb upstream 3083 true Chr3: 22428960-22432042 Arabidopsis thaliana
AT3G60680 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22428960-22429959 Arabidopsis thaliana
AT3G60680 1.0kb downstream 1.0kb downstream 3083 true Chr3: 22429960-22433042 Arabidopsis thaliana
AT3G60680 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22432043-22433042 Arabidopsis thaliana
AT3G60680 2.0kb upstream 2.0kb upstream 4083 true Chr3: 22427960-22432042 Arabidopsis thaliana
AT3G60680 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22427960-22429959 Arabidopsis thaliana
AT3G60680 2.0kb downstream 2.0kb downstream 4083 true Chr3: 22429960-22434042 Arabidopsis thaliana
AT3G60680 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22432043-22434042 Arabidopsis thaliana
AT3G60680 5.0kb upstream 5.0kb upstream 7083 true Chr3: 22424960-22432042 Arabidopsis thaliana
AT3G60680 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22424960-22429959 Arabidopsis thaliana
AT3G60680 5.0kb downstream 5.0kb downstream 7083 true Chr3: 22429960-22437042 Arabidopsis thaliana
AT3G60680 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22432043-22437042 Arabidopsis thaliana
AT3G60680 10.0kb upstream 10.0kb upstream 12083 true Chr3: 22419960-22432042 Arabidopsis thaliana
AT3G60680 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22419960-22429959 Arabidopsis thaliana
AT3G60680 10.0kb downstream 10.0kb downstream 12083 true Chr3: 22429960-22442042 Arabidopsis thaliana
AT3G60680 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22432043-22442042 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041512 5273 Angiosperm View MSA
122376868 5261 Brassicaceae View MSA
123829232 5264 Brassicales-Malvales View MSA
124343617 5266 SBM View MSA
124239234 5268 Malvidae View MSA
124060813 5270 Rosid View MSA
123741078 5271 Pentapetalae View MSA
122786569 5272 Eudicot View MSA
121351569 5274 Embryophyte View MSA
123382231 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.353        
cufflinks 4.9        
cufflinks 1.505       Low
cufflinks 4.943        
cufflinks 1.669       Low
cufflinks 6.261       High

0 Strain