Gene : AT3G61320 A. thaliana TAIR10
Defline:  (1 of 2) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin) Genomic Order:  5198
Name:  ? AT3G61320 Secondary Identifier:  ? PAC:19663645
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G61320 0.5kb upstream 0.5kb upstream 2346 true Chr3: 22693409-22695754 Arabidopsis thaliana
AT3G61320 0.5kb upstream 0.5kb upstream 500 false Chr3: 22693409-22693908 Arabidopsis thaliana
AT3G61320 0.5kb downstream 0.5kb downstream 2346 true Chr3: 22693909-22696254 Arabidopsis thaliana
AT3G61320 0.5kb downstream 0.5kb downstream 500 false Chr3: 22695755-22696254 Arabidopsis thaliana
AT3G61320 1.0kb upstream 1.0kb upstream 2846 true Chr3: 22692909-22695754 Arabidopsis thaliana
AT3G61320 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22692909-22693908 Arabidopsis thaliana
AT3G61320 1.0kb downstream 1.0kb downstream 2846 true Chr3: 22693909-22696754 Arabidopsis thaliana
AT3G61320 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22695755-22696754 Arabidopsis thaliana
AT3G61320 2.0kb upstream 2.0kb upstream 3846 true Chr3: 22691909-22695754 Arabidopsis thaliana
AT3G61320 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22691909-22693908 Arabidopsis thaliana
AT3G61320 2.0kb downstream 2.0kb downstream 3846 true Chr3: 22693909-22697754 Arabidopsis thaliana
AT3G61320 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22695755-22697754 Arabidopsis thaliana
AT3G61320 5.0kb upstream 5.0kb upstream 6846 true Chr3: 22688909-22695754 Arabidopsis thaliana
AT3G61320 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22688909-22693908 Arabidopsis thaliana
AT3G61320 5.0kb downstream 5.0kb downstream 6846 true Chr3: 22693909-22700754 Arabidopsis thaliana
AT3G61320 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22695755-22700754 Arabidopsis thaliana
AT3G61320 10.0kb upstream 10.0kb upstream 11846 true Chr3: 22683909-22695754 Arabidopsis thaliana
AT3G61320 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22683909-22693908 Arabidopsis thaliana
AT3G61320 10.0kb downstream 10.0kb downstream 11846 true Chr3: 22693909-22705754 Arabidopsis thaliana
AT3G61320 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22695755-22705754 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380185 5261 Brassicaceae View MSA
123832665 5264 Brassicales-Malvales View MSA
124339133 5266 SBM View MSA
124243697 5268 Malvidae View MSA
124066850 5270 Rosid View MSA
123736824 5271 Pentapetalae View MSA
122787113 5272 Eudicot View MSA
122051206 5273 Angiosperm View MSA
121349752 5274 Embryophyte View MSA
123427884 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.091       High
cufflinks 4.375        
cufflinks 9.352       High
cufflinks 3.965       Low
cufflinks 7.621        
cufflinks 4.407        

0 Strain