Gene : Seita.9G415100 S. italica v2.2
Defline:  (1 of 2) 3.1.2.6 - Hydroxyacylglutathione hydrolase / Glyoxalase II Genomic Order:  4151
Name:  ? Seita.9G415100 Secondary Identifier:  ? PAC:32688435
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G415100 0.5kb upstream 0.5kb upstream 4404 true scaffold_9: 47227063-47231466 Setaria italica
Seita.9G415100 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 47227063-47227562 Setaria italica
Seita.9G415100 0.5kb downstream 0.5kb downstream 4404 true scaffold_9: 47227563-47231966 Setaria italica
Seita.9G415100 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 47231467-47231966 Setaria italica
Seita.9G415100 1.0kb upstream 1.0kb upstream 4904 true scaffold_9: 47226563-47231466 Setaria italica
Seita.9G415100 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 47226563-47227562 Setaria italica
Seita.9G415100 1.0kb downstream 1.0kb downstream 4904 true scaffold_9: 47227563-47232466 Setaria italica
Seita.9G415100 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 47231467-47232466 Setaria italica
Seita.9G415100 2.0kb upstream 2.0kb upstream 5904 true scaffold_9: 47225563-47231466 Setaria italica
Seita.9G415100 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 47225563-47227562 Setaria italica
Seita.9G415100 2.0kb downstream 2.0kb downstream 5904 true scaffold_9: 47227563-47233466 Setaria italica
Seita.9G415100 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 47231467-47233466 Setaria italica
Seita.9G415100 5.0kb upstream 5.0kb upstream 8904 true scaffold_9: 47222563-47231466 Setaria italica
Seita.9G415100 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 47222563-47227562 Setaria italica
Seita.9G415100 5.0kb downstream 5.0kb downstream 8904 true scaffold_9: 47227563-47236466 Setaria italica
Seita.9G415100 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 47231467-47236466 Setaria italica
Seita.9G415100 10.0kb upstream 10.0kb upstream 13904 true scaffold_9: 47217563-47231466 Setaria italica
Seita.9G415100 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 47217563-47227562 Setaria italica
Seita.9G415100 10.0kb downstream 10.0kb downstream 13904 true scaffold_9: 47227563-47241466 Setaria italica
Seita.9G415100 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 47231467-47241466 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177547 5267 Panicoideae View MSA
124573683 5269 Grass View MSA
122047531 5273 Angiosperm View MSA
121343802 5274 Embryophyte View MSA
123424781 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.901     High  
cufflinks 18.576     High  
cufflinks 20.695     High  
cufflinks 21.079     High  
cufflinks 18.832     High  
cufflinks 18.001     High  
cufflinks 14.853     High Low
cufflinks 14.795     High Low
cufflinks 16.647     High  
cufflinks 24.881     High High
cufflinks 14.339     High Low
cufflinks 16.938     High  
cufflinks 24.198     High High
cufflinks 19.753     High  
cufflinks 15.289     High  
cufflinks 14.855     High Low
cufflinks 22.077     High High
cufflinks 13.972     High Low
cufflinks 22.307     High High
cufflinks 16.546     High  

0 Strain