Gene : Seita.9G096100 S. italica v2.2
Genomic Order:  961 Name:  ? Seita.9G096100
Secondary Identifier:  ? PAC:32690841
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G096100 0.5kb upstream 0.5kb upstream 5133 true scaffold_9: 5755583-5760715 Setaria italica
Seita.9G096100 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 5760216-5760715 Setaria italica
Seita.9G096100 0.5kb downstream 0.5kb downstream 5133 true scaffold_9: 5755083-5760215 Setaria italica
Seita.9G096100 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 5755083-5755582 Setaria italica
Seita.9G096100 1.0kb upstream 1.0kb upstream 5633 true scaffold_9: 5755583-5761215 Setaria italica
Seita.9G096100 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 5760216-5761215 Setaria italica
Seita.9G096100 1.0kb downstream 1.0kb downstream 5633 true scaffold_9: 5754583-5760215 Setaria italica
Seita.9G096100 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 5754583-5755582 Setaria italica
Seita.9G096100 2.0kb upstream 2.0kb upstream 6633 true scaffold_9: 5755583-5762215 Setaria italica
Seita.9G096100 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 5760216-5762215 Setaria italica
Seita.9G096100 2.0kb downstream 2.0kb downstream 6633 true scaffold_9: 5753583-5760215 Setaria italica
Seita.9G096100 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 5753583-5755582 Setaria italica
Seita.9G096100 5.0kb upstream 5.0kb upstream 9633 true scaffold_9: 5755583-5765215 Setaria italica
Seita.9G096100 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 5760216-5765215 Setaria italica
Seita.9G096100 5.0kb downstream 5.0kb downstream 9633 true scaffold_9: 5750583-5760215 Setaria italica
Seita.9G096100 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 5750583-5755582 Setaria italica
Seita.9G096100 10.0kb upstream 10.0kb upstream 14633 true scaffold_9: 5755583-5770215 Setaria italica
Seita.9G096100 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 5760216-5770215 Setaria italica
Seita.9G096100 10.0kb downstream 10.0kb downstream 14633 true scaffold_9: 5745583-5760215 Setaria italica
Seita.9G096100 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 5745583-5755582 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041149 5273 Angiosperm View MSA
122184237 5267 Panicoideae View MSA
124574622 5269 Grass View MSA
121344307 5274 Embryophyte View MSA
123426135 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.423        
cufflinks 12.609        
cufflinks 346.464     High High
cufflinks 234.739     High High
cufflinks 212.961     High High
cufflinks 4.757        
cufflinks 73.597     High  
cufflinks 141.721     High  
cufflinks 70.328     High  
cufflinks 1.148        
cufflinks 1.493        
cufflinks 0.231       Low
cufflinks 0.303       Low
cufflinks 157.147     High  
cufflinks 0.315       Low
cufflinks 84.319     High  
cufflinks 0.208       Low
cufflinks 13.799     High  
cufflinks 225.123     High High
cufflinks 0.286       Low

0 Strain