Gene : Seita.7G233200 S. italica v2.2
Genomic Order:  2332 Name:  ? Seita.7G233200
Secondary Identifier:  ? PAC:32702368
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G233200 0.5kb upstream 0.5kb upstream 2013 true scaffold_7: 29659372-29661384 Setaria italica
Seita.7G233200 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 29659372-29659871 Setaria italica
Seita.7G233200 0.5kb downstream 0.5kb downstream 2013 true scaffold_7: 29659872-29661884 Setaria italica
Seita.7G233200 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 29661385-29661884 Setaria italica
Seita.7G233200 1.0kb upstream 1.0kb upstream 2513 true scaffold_7: 29658872-29661384 Setaria italica
Seita.7G233200 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 29658872-29659871 Setaria italica
Seita.7G233200 1.0kb downstream 1.0kb downstream 2513 true scaffold_7: 29659872-29662384 Setaria italica
Seita.7G233200 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 29661385-29662384 Setaria italica
Seita.7G233200 2.0kb upstream 2.0kb upstream 3513 true scaffold_7: 29657872-29661384 Setaria italica
Seita.7G233200 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 29657872-29659871 Setaria italica
Seita.7G233200 2.0kb downstream 2.0kb downstream 3513 true scaffold_7: 29659872-29663384 Setaria italica
Seita.7G233200 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 29661385-29663384 Setaria italica
Seita.7G233200 5.0kb upstream 5.0kb upstream 6513 true scaffold_7: 29654872-29661384 Setaria italica
Seita.7G233200 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 29654872-29659871 Setaria italica
Seita.7G233200 5.0kb downstream 5.0kb downstream 6513 true scaffold_7: 29659872-29666384 Setaria italica
Seita.7G233200 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 29661385-29666384 Setaria italica
Seita.7G233200 10.0kb upstream 10.0kb upstream 11513 true scaffold_7: 29649872-29661384 Setaria italica
Seita.7G233200 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 29649872-29659871 Setaria italica
Seita.7G233200 10.0kb downstream 10.0kb downstream 11513 true scaffold_7: 29659872-29671384 Setaria italica
Seita.7G233200 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 29661385-29671384 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199614 5267 Panicoideae View MSA
124583200 5269 Grass View MSA
122049403 5273 Angiosperm View MSA
121349103 5274 Embryophyte View MSA
123381168 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.308     High  
cufflinks 26.046     High  
cufflinks 4.95       Low
cufflinks 5.407       Low
cufflinks 6.813       Low
cufflinks 24.022     High  
cufflinks 15.808     High  
cufflinks 25.092     High  
cufflinks 17.513     High  
cufflinks 82.216     High High
cufflinks 17.219     High  
cufflinks 22.839     High  
cufflinks 15.541     High  
cufflinks 11.696        
cufflinks 16.847     High  
cufflinks 26.788     High  
cufflinks 27.805     High  
cufflinks 30.601     High  
cufflinks 5.47       Low
cufflinks 20.902     High  

0 Strain