Gene : Seita.4G140700 S. italica v2.2
Defline:  (1 of 1) PTHR24064:SF210 - INORGANIC PHOSPHATE TRANSPORTER 1-8-RELATED Genomic Order:  1407
Name:  ? Seita.4G140700 Secondary Identifier:  ? PAC:32706766
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G140700 0.5kb upstream 0.5kb upstream 4016 true scaffold_4: 16272625-16276640 Setaria italica
Seita.4G140700 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 16272625-16273124 Setaria italica
Seita.4G140700 0.5kb downstream 0.5kb downstream 4016 true scaffold_4: 16273125-16277140 Setaria italica
Seita.4G140700 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 16276641-16277140 Setaria italica
Seita.4G140700 1.0kb upstream 1.0kb upstream 4516 true scaffold_4: 16272125-16276640 Setaria italica
Seita.4G140700 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 16272125-16273124 Setaria italica
Seita.4G140700 1.0kb downstream 1.0kb downstream 4516 true scaffold_4: 16273125-16277640 Setaria italica
Seita.4G140700 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 16276641-16277640 Setaria italica
Seita.4G140700 2.0kb upstream 2.0kb upstream 5516 true scaffold_4: 16271125-16276640 Setaria italica
Seita.4G140700 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 16271125-16273124 Setaria italica
Seita.4G140700 2.0kb downstream 2.0kb downstream 5516 true scaffold_4: 16273125-16278640 Setaria italica
Seita.4G140700 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 16276641-16278640 Setaria italica
Seita.4G140700 5.0kb upstream 5.0kb upstream 8516 true scaffold_4: 16268125-16276640 Setaria italica
Seita.4G140700 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 16268125-16273124 Setaria italica
Seita.4G140700 5.0kb downstream 5.0kb downstream 8516 true scaffold_4: 16273125-16281640 Setaria italica
Seita.4G140700 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 16276641-16281640 Setaria italica
Seita.4G140700 10.0kb upstream 10.0kb upstream 13516 true scaffold_4: 16263125-16276640 Setaria italica
Seita.4G140700 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 16263125-16273124 Setaria italica
Seita.4G140700 10.0kb downstream 10.0kb downstream 13516 true scaffold_4: 16273125-16286640 Setaria italica
Seita.4G140700 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 16276641-16286640 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026368 5273 Angiosperm View MSA
122176154 5267 Panicoideae View MSA
124568464 5269 Grass View MSA
121296297 5274 Embryophyte View MSA
123334486 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.014     Low Low
cufflinks 0.426        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.447        
cufflinks 0.016     Low Low
cufflinks 0.031     Low  
cufflinks 0.046     Low  
cufflinks 0.095     Low  
cufflinks 0.043     Low  
cufflinks 9.785       High
cufflinks 1.085        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.385        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.431       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 15.693     High High

0 Strain