Gene : Seita.4G177700 S. italica v2.2
Defline:  (1 of 1) PTHR15243 - SERINE/THREONINE-PROTEIN KINASE 19 Genomic Order:  1777
Name:  ? Seita.4G177700 Secondary Identifier:  ? PAC:32709367
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G177700 0.5kb upstream 0.5kb upstream 5969 true scaffold_4: 28677607-28683575 Setaria italica
Seita.4G177700 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 28683076-28683575 Setaria italica
Seita.4G177700 0.5kb downstream 0.5kb downstream 5969 true scaffold_4: 28677107-28683075 Setaria italica
Seita.4G177700 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 28677107-28677606 Setaria italica
Seita.4G177700 1.0kb upstream 1.0kb upstream 6469 true scaffold_4: 28677607-28684075 Setaria italica
Seita.4G177700 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 28683076-28684075 Setaria italica
Seita.4G177700 1.0kb downstream 1.0kb downstream 6469 true scaffold_4: 28676607-28683075 Setaria italica
Seita.4G177700 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 28676607-28677606 Setaria italica
Seita.4G177700 2.0kb upstream 2.0kb upstream 7469 true scaffold_4: 28677607-28685075 Setaria italica
Seita.4G177700 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 28683076-28685075 Setaria italica
Seita.4G177700 2.0kb downstream 2.0kb downstream 7469 true scaffold_4: 28675607-28683075 Setaria italica
Seita.4G177700 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 28675607-28677606 Setaria italica
Seita.4G177700 5.0kb upstream 5.0kb upstream 10469 true scaffold_4: 28677607-28688075 Setaria italica
Seita.4G177700 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 28683076-28688075 Setaria italica
Seita.4G177700 5.0kb downstream 5.0kb downstream 10469 true scaffold_4: 28672607-28683075 Setaria italica
Seita.4G177700 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 28672607-28677606 Setaria italica
Seita.4G177700 10.0kb upstream 10.0kb upstream 15469 true scaffold_4: 28677607-28693075 Setaria italica
Seita.4G177700 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 28683076-28693075 Setaria italica
Seita.4G177700 10.0kb downstream 10.0kb downstream 15469 true scaffold_4: 28667607-28683075 Setaria italica
Seita.4G177700 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 28667607-28677606 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187428 5267 Panicoideae View MSA
124578428 5269 Grass View MSA
122044550 5273 Angiosperm View MSA
121347179 5274 Embryophyte View MSA
123424937 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.61        
cufflinks 4.919        
cufflinks 7.811       High
cufflinks 8.168       High
cufflinks 5.634        
cufflinks 4.06       Low
cufflinks 5.082        
cufflinks 5.582        
cufflinks 3.974       Low
cufflinks 4.206       Low
cufflinks 4.635        
cufflinks 5.691        
cufflinks 6.101        
cufflinks 7.19        
cufflinks 6.2        
cufflinks 8.115       High
cufflinks 6.574        
cufflinks 6.141        
cufflinks 9.387       High
cufflinks 5.134        

0 Strain