Gene : Sphfalx0043s0080 S. fallax v0.5
Defline:  (1 of 7) PTHR32098:SF5 - LYCOPENE BETA/EPSILON CYCLASE PROTEIN Genomic Order:  80
Name:  ? Sphfalx0043s0080 Secondary Identifier:  ? PAC:32610035
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sfallax CAROTENOID-PWY Sphagnum fallax pathologic  
Sfallax PWY-5943 Sphagnum fallax pathologic  
Sfallax PWY-5947 Sphagnum fallax pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sphfalx0043s0080 0.5kb upstream 0.5kb upstream 7900 true super_43: 1107169-1115068 Sphagnum fallax
Sphfalx0043s0080 0.5kb upstream 0.5kb upstream 500 false super_43: 1114569-1115068 Sphagnum fallax
Sphfalx0043s0080 0.5kb downstream 0.5kb downstream 7900 true super_43: 1106669-1114568 Sphagnum fallax
Sphfalx0043s0080 0.5kb downstream 0.5kb downstream 500 false super_43: 1106669-1107168 Sphagnum fallax
Sphfalx0043s0080 1.0kb upstream 1.0kb upstream 8400 true super_43: 1107169-1115568 Sphagnum fallax
Sphfalx0043s0080 1.0kb upstream 1.0kb upstream 1000 false super_43: 1114569-1115568 Sphagnum fallax
Sphfalx0043s0080 1.0kb downstream 1.0kb downstream 8400 true super_43: 1106169-1114568 Sphagnum fallax
Sphfalx0043s0080 1.0kb downstream 1.0kb downstream 1000 false super_43: 1106169-1107168 Sphagnum fallax
Sphfalx0043s0080 2.0kb upstream 2.0kb upstream 9400 true super_43: 1107169-1116568 Sphagnum fallax
Sphfalx0043s0080 2.0kb upstream 2.0kb upstream 2000 false super_43: 1114569-1116568 Sphagnum fallax
Sphfalx0043s0080 2.0kb downstream 2.0kb downstream 9400 true super_43: 1105169-1114568 Sphagnum fallax
Sphfalx0043s0080 2.0kb downstream 2.0kb downstream 2000 false super_43: 1105169-1107168 Sphagnum fallax
Sphfalx0043s0080 5.0kb upstream 5.0kb upstream 12400 true super_43: 1107169-1119568 Sphagnum fallax
Sphfalx0043s0080 5.0kb upstream 5.0kb upstream 5000 false super_43: 1114569-1119568 Sphagnum fallax
Sphfalx0043s0080 5.0kb downstream 5.0kb downstream 12400 true super_43: 1102169-1114568 Sphagnum fallax
Sphfalx0043s0080 5.0kb downstream 5.0kb downstream 5000 false super_43: 1102169-1107168 Sphagnum fallax
Sphfalx0043s0080 10.0kb upstream 10.0kb upstream 17400 true super_43: 1107169-1124568 Sphagnum fallax
Sphfalx0043s0080 10.0kb upstream 10.0kb upstream 10000 false super_43: 1114569-1124568 Sphagnum fallax
Sphfalx0043s0080 10.0kb downstream 10.0kb downstream 17400 true super_43: 1097169-1114568 Sphagnum fallax
Sphfalx0043s0080 10.0kb downstream 10.0kb downstream 10000 false super_43: 1097169-1107168 Sphagnum fallax

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121350076 5274 Embryophyte View MSA
123425500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain