Gene : Manes.12G071600 M. esculenta v6.1
Defline:  (1 of 1) PTHR32098:SF5 - LYCOPENE BETA/EPSILON CYCLASE PROTEIN Genomic Order:  716
Name:  ? Manes.12G071600 Secondary Identifier:  ? PAC:32345805
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mesculenta CAROTENOID-PWY Manihot esculenta pathologic  
Mesculenta PWY-5943 Manihot esculenta pathologic  
Mesculenta PWY-5947 Manihot esculenta pathologic  

Genomics

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Gene Structure Displayer

Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Manes.12G071600 0.5kb upstream 0.5kb upstream 8951 true Chromosome12: 7135212-7144162 Manihot esculenta
Manes.12G071600 0.5kb upstream 0.5kb upstream 500 false Chromosome12: 7135212-7135711 Manihot esculenta
Manes.12G071600 0.5kb downstream 0.5kb downstream 8951 true Chromosome12: 7135712-7144662 Manihot esculenta
Manes.12G071600 0.5kb downstream 0.5kb downstream 500 false Chromosome12: 7144163-7144662 Manihot esculenta
Manes.12G071600 1.0kb upstream 1.0kb upstream 9451 true Chromosome12: 7134712-7144162 Manihot esculenta
Manes.12G071600 1.0kb upstream 1.0kb upstream 1000 false Chromosome12: 7134712-7135711 Manihot esculenta
Manes.12G071600 1.0kb downstream 1.0kb downstream 9451 true Chromosome12: 7135712-7145162 Manihot esculenta
Manes.12G071600 1.0kb downstream 1.0kb downstream 1000 false Chromosome12: 7144163-7145162 Manihot esculenta
Manes.12G071600 2.0kb upstream 2.0kb upstream 10451 true Chromosome12: 7133712-7144162 Manihot esculenta
Manes.12G071600 2.0kb upstream 2.0kb upstream 2000 false Chromosome12: 7133712-7135711 Manihot esculenta
Manes.12G071600 2.0kb downstream 2.0kb downstream 10451 true Chromosome12: 7135712-7146162 Manihot esculenta
Manes.12G071600 2.0kb downstream 2.0kb downstream 2000 false Chromosome12: 7144163-7146162 Manihot esculenta
Manes.12G071600 5.0kb upstream 5.0kb upstream 13451 true Chromosome12: 7130712-7144162 Manihot esculenta
Manes.12G071600 5.0kb upstream 5.0kb upstream 5000 false Chromosome12: 7130712-7135711 Manihot esculenta
Manes.12G071600 5.0kb downstream 5.0kb downstream 13451 true Chromosome12: 7135712-7149162 Manihot esculenta
Manes.12G071600 5.0kb downstream 5.0kb downstream 5000 false Chromosome12: 7144163-7149162 Manihot esculenta
Manes.12G071600 10.0kb upstream 10.0kb upstream 18451 true Chromosome12: 7125712-7144162 Manihot esculenta
Manes.12G071600 10.0kb upstream 10.0kb upstream 10000 false Chromosome12: 7125712-7135711 Manihot esculenta
Manes.12G071600 10.0kb downstream 10.0kb downstream 18451 true Chromosome12: 7135712-7154162 Manihot esculenta
Manes.12G071600 10.0kb downstream 10.0kb downstream 10000 false Chromosome12: 7144163-7154162 Manihot esculenta

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457322 5262 Malpighiales View MSA
124238742 5268 Malvidae View MSA
124061081 5270 Rosid View MSA
123739346 5271 Pentapetalae View MSA
122787287 5272 Eudicot View MSA
122042056 5273 Angiosperm View MSA
121350076 5274 Embryophyte View MSA
123425500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain