Gene : Prupe.3G212600 P. persica v2.1
Defline:  (1 of 1) PTHR32098:SF5 - LYCOPENE BETA/EPSILON CYCLASE PROTEIN Genomic Order:  2126
Name:  ? Prupe.3G212600 Secondary Identifier:  ? PAC:32105212
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ppersica CAROTENOID-PWY Prunus persica pathologic  
Ppersica PWY-5943 Prunus persica pathologic  
Ppersica PWY-5947 Prunus persica pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Prupe.3G212600 0.5kb upstream 0.5kb upstream 5787 true Pp03: 21679119-21684905 Prunus persica
Prupe.3G212600 0.5kb upstream 0.5kb upstream 500 false Pp03: 21679119-21679618 Prunus persica
Prupe.3G212600 0.5kb downstream 0.5kb downstream 5787 true Pp03: 21679619-21685405 Prunus persica
Prupe.3G212600 0.5kb downstream 0.5kb downstream 500 false Pp03: 21684906-21685405 Prunus persica
Prupe.3G212600 1.0kb upstream 1.0kb upstream 6287 true Pp03: 21678619-21684905 Prunus persica
Prupe.3G212600 1.0kb upstream 1.0kb upstream 1000 false Pp03: 21678619-21679618 Prunus persica
Prupe.3G212600 1.0kb downstream 1.0kb downstream 6287 true Pp03: 21679619-21685905 Prunus persica
Prupe.3G212600 1.0kb downstream 1.0kb downstream 1000 false Pp03: 21684906-21685905 Prunus persica
Prupe.3G212600 2.0kb upstream 2.0kb upstream 7287 true Pp03: 21677619-21684905 Prunus persica
Prupe.3G212600 2.0kb upstream 2.0kb upstream 2000 false Pp03: 21677619-21679618 Prunus persica
Prupe.3G212600 2.0kb downstream 2.0kb downstream 7287 true Pp03: 21679619-21686905 Prunus persica
Prupe.3G212600 2.0kb downstream 2.0kb downstream 2000 false Pp03: 21684906-21686905 Prunus persica
Prupe.3G212600 5.0kb upstream 5.0kb upstream 10287 true Pp03: 21674619-21684905 Prunus persica
Prupe.3G212600 5.0kb upstream 5.0kb upstream 5000 false Pp03: 21674619-21679618 Prunus persica
Prupe.3G212600 5.0kb downstream 5.0kb downstream 10287 true Pp03: 21679619-21689905 Prunus persica
Prupe.3G212600 5.0kb downstream 5.0kb downstream 5000 false Pp03: 21684906-21689905 Prunus persica
Prupe.3G212600 10.0kb upstream 10.0kb upstream 15287 true Pp03: 21669619-21684905 Prunus persica
Prupe.3G212600 10.0kb upstream 10.0kb upstream 10000 false Pp03: 21669619-21679618 Prunus persica
Prupe.3G212600 10.0kb downstream 10.0kb downstream 15287 true Pp03: 21679619-21694905 Prunus persica
Prupe.3G212600 10.0kb downstream 10.0kb downstream 10000 false Pp03: 21684906-21694905 Prunus persica

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307883 5265 Fabidae View MSA
124061081 5270 Rosid View MSA
123739346 5271 Pentapetalae View MSA
122787287 5272 Eudicot View MSA
122042056 5273 Angiosperm View MSA
121350076 5274 Embryophyte View MSA
123425500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain