Protein Domain : IPR001304

Type:  Domain Name:  C-type lectin
Description:  Lectins occur in plants, animals, bacteria and viruses. Initially described for their carbohydrate-binding activity [], they are now recognised as a more diverse group of proteins, some of which are involved in protein-protein, protein-lipid or protein-nucleic acid interactions []. There are at least twelve structural families of lectins:C-type lectins, which are Ca+-dependent. S-type (galectins), a widespread family of glycan-binding proteins [].I-type, which have an immunoglobulin-like fold and can recognise sialic acids, other sugars and glycosaminoglycans [].P-type, which bind phosphomannosyl receptors [].Pentraxins [].(Trout) egg lectins.Calreticulin and calnexin, which act as molecular chaperones of the endoplasmic reticulum [].ERGIC-53 and VIP-36 [].Discoidins [].Eel aggutinins (fucolectins) [].Annexin lectins [].Fibrinogen-type lectins, which includes ficolins, tachylectins 5A and 5B, and Limax flavus(Spotted garden slug) agglutinin (these proteins have clear distinctions from one another, but they share a homologous fibrinogen-like domain used for carbohydrate binding).Also unclassified orphan lectins, including amphoterin, Cel-II, complement factor H, thrombospondin, sailic acid-binding lectins, adherence lectin, and cytokins (such as tumour necrosis factor and several interleukins).C-type lectins can be further divided into seven subgroups based on additional non-lectin domains and gene structure: (I) hyalectans, (II) asialoglycoprotein receptors, (III) collectins, (IV) selectins, (V) NK group transmembrane receptors, (VI) macrophage mannose receptors, and (VII) simple (single domain) lectins [].Therefore, lectins are a diverse group of proteins, both in terms of structure and activity. Carbohydrate binding ability may have evolved independently and sporadically in numerous unrelated families, where each evolved a structure that was conserved to fulfil some other activity and function. In general, animal lectins act as recognition molecules within the immune system, their functions involving defence against pathogens, cell trafficking, immune regulation and the prevention of autoimmunity []. Short Name:  C-type_lectin

0 Child Features

1 Contains

DB identifier Type Name
IPR018378 Conserved_site C-type lectin, conserved site

3 Cross Referencess

Identifier
PF00059
PS50041
SM00034

6 Found Ins

DB identifier Type Name
IPR002353 Family Type-2 ice-structuring protein
IPR002352 Family Eosinophil major basic protein
IPR002396 Family Selectin superfamily
IPR016316 Family Thrombomodulin
IPR016348 Family L-selectin
IPR006228 Domain Polycystin cation channel

0 GO Annotation

0 Ontology Annotations

1 Parent Features

DB identifier Type Name
IPR016186 Domain C-type lectin-like

537 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
82185 D8R0Q1 PAC:15408978 Selaginella moellendorffii 548  
30063.m001401 B9S040 PAC:16816358 Ricinus communis 552  
Cucsa.134550.1 PAC:16962820 Cucumis sativus 557  
Cucsa.134550.2 PAC:16962821 Cucumis sativus 530  
orange1.1g008216m A0A067GPD2 PAC:18138681 Citrus sinensis 573  
orange1.1g008672m A0A067GF43 PAC:18138682 Citrus sinensis 557  
orange1.1g008698m A0A067GF43 PAC:18138683 Citrus sinensis 557  
orange1.1g008785m A0A067GC60 PAC:18138684 Citrus sinensis 553  
orange1.1g010309m A0A067GPD6 PAC:18138685 Citrus sinensis 513  
orange1.1g016754m A0A067GPN3 PAC:18138686 Citrus sinensis 383  
AT1G52310.1 Q9C823 PAC:19655225 Arabidopsis thaliana 552  
Thhalv10011366m V4MFY5 PAC:20184173 Eutrema salsugineum 552  
Ciclev10014781m V4W6V6 PAC:20816105 Citrus clementina 557  
Ciclev10014779m V4W6V6 PAC:20816106 Citrus clementina 557  
Ciclev10014946m V4TMZ8 PAC:20816107 Citrus clementina 513  
Lus10023500 PAC:23160533 Linum usitatissimum 542  
Lus10040381 PAC:23173888 Linum usitatissimum 541  
Potri.001G160300.3 PAC:27045199 Populus trichocarpa 517  
Potri.001G160300.4 PAC:27045200 Populus trichocarpa 516  
Potri.001G160300.2 U5GT82 PAC:27045198 Populus trichocarpa 544  
Potri.001G160300.1 U5GT82 PAC:27045197 Populus trichocarpa 544  
Gorai.002G163600.1 A0A0D2QDX7 PAC:26791887 Gossypium raimondii 550  
Gorai.002G163600.3 A0A0D2MBU8 PAC:26791889 Gossypium raimondii 534  
Gorai.002G163600.2 A0A0D2R772 PAC:26791888 Gossypium raimondii 547  
Thecc1EG006003t1 A0A061DVN0 PAC:27460474 Theobroma cacao 537  
Migut.M02006.1.p A0A022RV71 PAC:28950225 Mimulus guttatus 555  
Cagra.0205s0009.1.p PAC:28909029 Capsella grandiflora 553  
Glyma.09G072500.2.p A0A0R0I551 PAC:30485750 Glycine max 495  
Glyma.09G072500.1.p K7LCA5 PAC:30485749 Glycine max 545  
Glyma.15G181400.1.p K7MC66 PAC:30496212 Glycine max 547  

13 Publications

First Author Title Year Journal Volume Pages PubMed ID
            10924498
            14533786
            12223269
            17497244
            12223277
            12223278
            16343883
            17702679
            15813707
            15476922
            14519388
            7876089
            17072021