Gene : Eucgr.L01337 E. grandis v2.0
Defline:  (1 of 2) PF10193 - Telomere length regulation protein (Telomere_reg-2) Genomic Order:  3
Name:  ? Eucgr.L01337 Secondary Identifier:  ? PAC:32049367
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L01337 0.5kb upstream 0.5kb upstream 8077 true scaffold_171: 11026-19102 Eucalyptus grandis
Eucgr.L01337 0.5kb upstream 0.5kb upstream 500 false scaffold_171: 18603-19102 Eucalyptus grandis
Eucgr.L01337 0.5kb downstream 0.5kb downstream 8077 true scaffold_171: 10526-18602 Eucalyptus grandis
Eucgr.L01337 0.5kb downstream 0.5kb downstream 500 false scaffold_171: 10526-11025 Eucalyptus grandis
Eucgr.L01337 1.0kb upstream 1.0kb upstream 8577 true scaffold_171: 11026-19602 Eucalyptus grandis
Eucgr.L01337 1.0kb upstream 1.0kb upstream 1000 false scaffold_171: 18603-19602 Eucalyptus grandis
Eucgr.L01337 1.0kb downstream 1.0kb downstream 8577 true scaffold_171: 10026-18602 Eucalyptus grandis
Eucgr.L01337 1.0kb downstream 1.0kb downstream 1000 false scaffold_171: 10026-11025 Eucalyptus grandis
Eucgr.L01337 2.0kb upstream 2.0kb upstream 9577 true scaffold_171: 11026-20602 Eucalyptus grandis
Eucgr.L01337 2.0kb upstream 2.0kb upstream 2000 false scaffold_171: 18603-20602 Eucalyptus grandis
Eucgr.L01337 2.0kb downstream 2.0kb downstream 9577 true scaffold_171: 9026-18602 Eucalyptus grandis
Eucgr.L01337 2.0kb downstream 2.0kb downstream 2000 false scaffold_171: 9026-11025 Eucalyptus grandis
Eucgr.L01337 5.0kb upstream 5.0kb upstream 12577 true scaffold_171: 11026-23602 Eucalyptus grandis
Eucgr.L01337 5.0kb upstream 5.0kb upstream 5000 false scaffold_171: 18603-23602 Eucalyptus grandis
Eucgr.L01337 5.0kb downstream 5.0kb downstream 12577 true scaffold_171: 6026-18602 Eucalyptus grandis
Eucgr.L01337 5.0kb downstream 5.0kb downstream 5000 false scaffold_171: 6026-11025 Eucalyptus grandis
Eucgr.L01337 10.0kb upstream 10.0kb upstream 17577 true scaffold_171: 11026-28602 Eucalyptus grandis
Eucgr.L01337 10.0kb upstream 10.0kb upstream 10000 false scaffold_171: 18603-28602 Eucalyptus grandis
Eucgr.L01337 10.0kb downstream 10.0kb downstream 17577 true scaffold_171: 1026-18602 Eucalyptus grandis
Eucgr.L01337 10.0kb downstream 10.0kb downstream 10000 false scaffold_171: 1026-11025 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070341 5270 Rosid View MSA
123736800 5271 Pentapetalae View MSA
122791888 5272 Eudicot View MSA
122046631 5273 Angiosperm View MSA
121345075 5274 Embryophyte View MSA
123425275 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.51304 0.0 6.15789   Low
cufflinks 5.47183 0.0 12.7309    
cufflinks 2.39136 0.0 5.86176   Low
cufflinks 3.85701 0.0 8.93359    
cufflinks 5.59518 0.0 13.0796   High
cufflinks 4.5315 0.0 10.4861    

0 Strain