Gene : Eucgr.L02565 E. grandis v2.0
Defline:  (1 of 1) PTHR21349:SF0 - 39S RIBOSOMAL PROTEIN L21, MITOCHONDRIAL Genomic Order:  2
Name:  ? Eucgr.L02565 Secondary Identifier:  ? PAC:32035827
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L02565 0.5kb upstream 0.5kb upstream 3703 true scaffold_1033: 7567-11269 Eucalyptus grandis
Eucgr.L02565 0.5kb upstream 0.5kb upstream 500 false scaffold_1033: 7567-8066 Eucalyptus grandis
Eucgr.L02565 0.5kb downstream 0.5kb downstream 3703 true scaffold_1033: 8067-11769 Eucalyptus grandis
Eucgr.L02565 0.5kb downstream 0.5kb downstream 500 false scaffold_1033: 11270-11769 Eucalyptus grandis
Eucgr.L02565 1.0kb upstream 1.0kb upstream 4203 true scaffold_1033: 7067-11269 Eucalyptus grandis
Eucgr.L02565 1.0kb upstream 1.0kb upstream 1000 false scaffold_1033: 7067-8066 Eucalyptus grandis
Eucgr.L02565 1.0kb downstream 1.0kb downstream 4203 true scaffold_1033: 8067-12269 Eucalyptus grandis
Eucgr.L02565 1.0kb downstream 1.0kb downstream 1000 false scaffold_1033: 11270-12269 Eucalyptus grandis
Eucgr.L02565 2.0kb upstream 2.0kb upstream 5203 true scaffold_1033: 6067-11269 Eucalyptus grandis
Eucgr.L02565 2.0kb upstream 2.0kb upstream 2000 false scaffold_1033: 6067-8066 Eucalyptus grandis
Eucgr.L02565 2.0kb downstream 2.0kb downstream 5203 true scaffold_1033: 8067-13269 Eucalyptus grandis
Eucgr.L02565 2.0kb downstream 2.0kb downstream 2000 false scaffold_1033: 11270-13269 Eucalyptus grandis
Eucgr.L02565 5.0kb upstream 5.0kb upstream 8203 true scaffold_1033: 3067-11269 Eucalyptus grandis
Eucgr.L02565 5.0kb upstream 5.0kb upstream 5000 false scaffold_1033: 3067-8066 Eucalyptus grandis
Eucgr.L02565 5.0kb downstream 5.0kb downstream 5650 true scaffold_1033: 8067-13716 Eucalyptus grandis
Eucgr.L02565 5.0kb downstream 5.0kb downstream 2447 false scaffold_1033: 11270-13716 Eucalyptus grandis
Eucgr.L02565 10.0kb upstream 10.0kb upstream 11269 true scaffold_1033: 1-11269 Eucalyptus grandis
Eucgr.L02565 10.0kb upstream 10.0kb upstream 8066 false scaffold_1033: 1-8066 Eucalyptus grandis
Eucgr.L02565 10.0kb downstream 10.0kb downstream 5650 true scaffold_1033: 8067-13716 Eucalyptus grandis
Eucgr.L02565 10.0kb downstream 10.0kb downstream 2447 false scaffold_1033: 11270-13716 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069865 5270 Rosid View MSA
123750410 5271 Pentapetalae View MSA
122791775 5272 Eudicot View MSA
122045710 5273 Angiosperm View MSA
121350514 5274 Embryophyte View MSA
123424430 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.7728 0.0 29.2998   High
cufflinks 5.71827 0.0 14.0984   Low
cufflinks 11.7724 0.0 27.1959    
cufflinks 7.26016 0.0 17.4593    
cufflinks 9.60869 0.0 22.5736    
cufflinks 7.45551 0.0 17.8528    

0 Strain