Gene : Eucgr.K03560 E. grandis v2.0
Defline:  (1 of 1) PTHR12855:SF10 - DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 Genomic Order:  2986
Name:  ? Eucgr.K03560 Secondary Identifier:  ? PAC:32066842
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K03560 0.5kb upstream 0.5kb upstream 6029 true Chr11: 43992599-43998627 Eucalyptus grandis
Eucgr.K03560 0.5kb upstream 0.5kb upstream 500 false Chr11: 43998128-43998627 Eucalyptus grandis
Eucgr.K03560 0.5kb downstream 0.5kb downstream 6029 true Chr11: 43992099-43998127 Eucalyptus grandis
Eucgr.K03560 0.5kb downstream 0.5kb downstream 500 false Chr11: 43992099-43992598 Eucalyptus grandis
Eucgr.K03560 1.0kb upstream 1.0kb upstream 6529 true Chr11: 43992599-43999127 Eucalyptus grandis
Eucgr.K03560 1.0kb upstream 1.0kb upstream 1000 false Chr11: 43998128-43999127 Eucalyptus grandis
Eucgr.K03560 1.0kb downstream 1.0kb downstream 6529 true Chr11: 43991599-43998127 Eucalyptus grandis
Eucgr.K03560 1.0kb downstream 1.0kb downstream 1000 false Chr11: 43991599-43992598 Eucalyptus grandis
Eucgr.K03560 2.0kb upstream 2.0kb upstream 7529 true Chr11: 43992599-44000127 Eucalyptus grandis
Eucgr.K03560 2.0kb upstream 2.0kb upstream 2000 false Chr11: 43998128-44000127 Eucalyptus grandis
Eucgr.K03560 2.0kb downstream 2.0kb downstream 7529 true Chr11: 43990599-43998127 Eucalyptus grandis
Eucgr.K03560 2.0kb downstream 2.0kb downstream 2000 false Chr11: 43990599-43992598 Eucalyptus grandis
Eucgr.K03560 5.0kb upstream 5.0kb upstream 10529 true Chr11: 43992599-44003127 Eucalyptus grandis
Eucgr.K03560 5.0kb upstream 5.0kb upstream 5000 false Chr11: 43998128-44003127 Eucalyptus grandis
Eucgr.K03560 5.0kb downstream 5.0kb downstream 10529 true Chr11: 43987599-43998127 Eucalyptus grandis
Eucgr.K03560 5.0kb downstream 5.0kb downstream 5000 false Chr11: 43987599-43992598 Eucalyptus grandis
Eucgr.K03560 10.0kb upstream 10.0kb upstream 15529 true Chr11: 43992599-44008127 Eucalyptus grandis
Eucgr.K03560 10.0kb upstream 10.0kb upstream 10000 false Chr11: 43998128-44008127 Eucalyptus grandis
Eucgr.K03560 10.0kb downstream 10.0kb downstream 15529 true Chr11: 43982599-43998127 Eucalyptus grandis
Eucgr.K03560 10.0kb downstream 10.0kb downstream 10000 false Chr11: 43982599-43992598 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064017 5270 Rosid View MSA
123739698 5271 Pentapetalae View MSA
122786949 5272 Eudicot View MSA
122041546 5273 Angiosperm View MSA
123429045 5275 Viridiplantae View MSA
121347026 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.83764 0.0 20.6059    
cufflinks 2.80286 0.0 7.16017   Low
cufflinks 6.55387 0.0 15.1188    
cufflinks 4.34356 0.0 10.3596    
cufflinks 7.04943 0.0 16.1778    
cufflinks 9.28521 0.0 21.8659   High

0 Strain