Gene : Eucgr.K01682 E. grandis v2.0
Defline:  (1 of 1) PTHR10145 - TRANSCRIPTION ELONGATION FACTOR SPT6 Genomic Order:  1339
Name:  ? Eucgr.K01682 Secondary Identifier:  ? PAC:32066704
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01682 0.5kb upstream 0.5kb upstream 11086 true Chr11: 19531614-19542699 Eucalyptus grandis
Eucgr.K01682 0.5kb upstream 0.5kb upstream 500 false Chr11: 19542200-19542699 Eucalyptus grandis
Eucgr.K01682 0.5kb downstream 0.5kb downstream 11086 true Chr11: 19531114-19542199 Eucalyptus grandis
Eucgr.K01682 0.5kb downstream 0.5kb downstream 500 false Chr11: 19531114-19531613 Eucalyptus grandis
Eucgr.K01682 1.0kb upstream 1.0kb upstream 11586 true Chr11: 19531614-19543199 Eucalyptus grandis
Eucgr.K01682 1.0kb upstream 1.0kb upstream 1000 false Chr11: 19542200-19543199 Eucalyptus grandis
Eucgr.K01682 1.0kb downstream 1.0kb downstream 11586 true Chr11: 19530614-19542199 Eucalyptus grandis
Eucgr.K01682 1.0kb downstream 1.0kb downstream 1000 false Chr11: 19530614-19531613 Eucalyptus grandis
Eucgr.K01682 2.0kb upstream 2.0kb upstream 12586 true Chr11: 19531614-19544199 Eucalyptus grandis
Eucgr.K01682 2.0kb upstream 2.0kb upstream 2000 false Chr11: 19542200-19544199 Eucalyptus grandis
Eucgr.K01682 2.0kb downstream 2.0kb downstream 12586 true Chr11: 19529614-19542199 Eucalyptus grandis
Eucgr.K01682 2.0kb downstream 2.0kb downstream 2000 false Chr11: 19529614-19531613 Eucalyptus grandis
Eucgr.K01682 5.0kb upstream 5.0kb upstream 15586 true Chr11: 19531614-19547199 Eucalyptus grandis
Eucgr.K01682 5.0kb upstream 5.0kb upstream 5000 false Chr11: 19542200-19547199 Eucalyptus grandis
Eucgr.K01682 5.0kb downstream 5.0kb downstream 15586 true Chr11: 19526614-19542199 Eucalyptus grandis
Eucgr.K01682 5.0kb downstream 5.0kb downstream 5000 false Chr11: 19526614-19531613 Eucalyptus grandis
Eucgr.K01682 10.0kb upstream 10.0kb upstream 20586 true Chr11: 19531614-19552199 Eucalyptus grandis
Eucgr.K01682 10.0kb upstream 10.0kb upstream 10000 false Chr11: 19542200-19552199 Eucalyptus grandis
Eucgr.K01682 10.0kb downstream 10.0kb downstream 20586 true Chr11: 19521614-19542199 Eucalyptus grandis
Eucgr.K01682 10.0kb downstream 10.0kb downstream 10000 false Chr11: 19521614-19531613 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072790 5270 Rosid View MSA
123737056 5271 Pentapetalae View MSA
122788563 5272 Eudicot View MSA
122044627 5273 Angiosperm View MSA
121347900 5274 Embryophyte View MSA
123426736 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.3565 0.0 48.4769   High
cufflinks 10.0509 0.0 22.2561    
cufflinks 20.2856 0.0 46.0299   High
cufflinks 10.5521 0.0 23.3998    
cufflinks 9.61333 0.0 21.2739    
cufflinks 15.4685 0.0 34.5393    

0 Strain