Gene : Eucgr.J03017 E. grandis v2.0
Defline:  (1 of 1) PTHR23074:SF19 - KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 Genomic Order:  2489
Name:  ? Eucgr.J03017 Secondary Identifier:  ? PAC:32035589
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J03017 0.5kb upstream 0.5kb upstream 4613 true Chr10: 35780818-35785430 Eucalyptus grandis
Eucgr.J03017 0.5kb upstream 0.5kb upstream 500 false Chr10: 35780818-35781317 Eucalyptus grandis
Eucgr.J03017 0.5kb downstream 0.5kb downstream 4613 true Chr10: 35781318-35785930 Eucalyptus grandis
Eucgr.J03017 0.5kb downstream 0.5kb downstream 500 false Chr10: 35785431-35785930 Eucalyptus grandis
Eucgr.J03017 1.0kb upstream 1.0kb upstream 5113 true Chr10: 35780318-35785430 Eucalyptus grandis
Eucgr.J03017 1.0kb upstream 1.0kb upstream 1000 false Chr10: 35780318-35781317 Eucalyptus grandis
Eucgr.J03017 1.0kb downstream 1.0kb downstream 5113 true Chr10: 35781318-35786430 Eucalyptus grandis
Eucgr.J03017 1.0kb downstream 1.0kb downstream 1000 false Chr10: 35785431-35786430 Eucalyptus grandis
Eucgr.J03017 2.0kb upstream 2.0kb upstream 6113 true Chr10: 35779318-35785430 Eucalyptus grandis
Eucgr.J03017 2.0kb upstream 2.0kb upstream 2000 false Chr10: 35779318-35781317 Eucalyptus grandis
Eucgr.J03017 2.0kb downstream 2.0kb downstream 6113 true Chr10: 35781318-35787430 Eucalyptus grandis
Eucgr.J03017 2.0kb downstream 2.0kb downstream 2000 false Chr10: 35785431-35787430 Eucalyptus grandis
Eucgr.J03017 5.0kb upstream 5.0kb upstream 9113 true Chr10: 35776318-35785430 Eucalyptus grandis
Eucgr.J03017 5.0kb upstream 5.0kb upstream 5000 false Chr10: 35776318-35781317 Eucalyptus grandis
Eucgr.J03017 5.0kb downstream 5.0kb downstream 9113 true Chr10: 35781318-35790430 Eucalyptus grandis
Eucgr.J03017 5.0kb downstream 5.0kb downstream 5000 false Chr10: 35785431-35790430 Eucalyptus grandis
Eucgr.J03017 10.0kb upstream 10.0kb upstream 14113 true Chr10: 35771318-35785430 Eucalyptus grandis
Eucgr.J03017 10.0kb upstream 10.0kb upstream 10000 false Chr10: 35771318-35781317 Eucalyptus grandis
Eucgr.J03017 10.0kb downstream 10.0kb downstream 14113 true Chr10: 35781318-35795430 Eucalyptus grandis
Eucgr.J03017 10.0kb downstream 10.0kb downstream 10000 false Chr10: 35785431-35795430 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065389 5270 Rosid View MSA
123736381 5271 Pentapetalae View MSA
122791135 5272 Eudicot View MSA
122044987 5273 Angiosperm View MSA
121345525 5274 Embryophyte View MSA
123426944 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.0428 0.0 57.6196    
cufflinks 37.1396 0.0 82.7806    
cufflinks 23.1542 0.0 51.2053    
cufflinks 72.9867 0.0 169.137 High High
cufflinks 49.1747 0.0 110.802 High  
cufflinks 18.1182 0.0 40.1418   Low

0 Strain