Gene : Eucgr.J02449 E. grandis v2.0
Defline:  (1 of 7) PTHR22601//PTHR22601:SF12 - ISP4 LIKE PROTEIN Genomic Order:  2075
Name:  ? Eucgr.J02449 Secondary Identifier:  ? PAC:32034299
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02449 0.5kb upstream 0.5kb upstream 5132 true Chr10: 29810824-29815955 Eucalyptus grandis
Eucgr.J02449 0.5kb upstream 0.5kb upstream 500 false Chr10: 29815456-29815955 Eucalyptus grandis
Eucgr.J02449 0.5kb downstream 0.5kb downstream 5132 true Chr10: 29810324-29815455 Eucalyptus grandis
Eucgr.J02449 0.5kb downstream 0.5kb downstream 500 false Chr10: 29810324-29810823 Eucalyptus grandis
Eucgr.J02449 1.0kb upstream 1.0kb upstream 5632 true Chr10: 29810824-29816455 Eucalyptus grandis
Eucgr.J02449 1.0kb upstream 1.0kb upstream 1000 false Chr10: 29815456-29816455 Eucalyptus grandis
Eucgr.J02449 1.0kb downstream 1.0kb downstream 5632 true Chr10: 29809824-29815455 Eucalyptus grandis
Eucgr.J02449 1.0kb downstream 1.0kb downstream 1000 false Chr10: 29809824-29810823 Eucalyptus grandis
Eucgr.J02449 2.0kb upstream 2.0kb upstream 6632 true Chr10: 29810824-29817455 Eucalyptus grandis
Eucgr.J02449 2.0kb upstream 2.0kb upstream 2000 false Chr10: 29815456-29817455 Eucalyptus grandis
Eucgr.J02449 2.0kb downstream 2.0kb downstream 6632 true Chr10: 29808824-29815455 Eucalyptus grandis
Eucgr.J02449 2.0kb downstream 2.0kb downstream 2000 false Chr10: 29808824-29810823 Eucalyptus grandis
Eucgr.J02449 5.0kb upstream 5.0kb upstream 9632 true Chr10: 29810824-29820455 Eucalyptus grandis
Eucgr.J02449 5.0kb upstream 5.0kb upstream 5000 false Chr10: 29815456-29820455 Eucalyptus grandis
Eucgr.J02449 5.0kb downstream 5.0kb downstream 9632 true Chr10: 29805824-29815455 Eucalyptus grandis
Eucgr.J02449 5.0kb downstream 5.0kb downstream 5000 false Chr10: 29805824-29810823 Eucalyptus grandis
Eucgr.J02449 10.0kb upstream 10.0kb upstream 14632 true Chr10: 29810824-29825455 Eucalyptus grandis
Eucgr.J02449 10.0kb upstream 10.0kb upstream 10000 false Chr10: 29815456-29825455 Eucalyptus grandis
Eucgr.J02449 10.0kb downstream 10.0kb downstream 14632 true Chr10: 29800824-29815455 Eucalyptus grandis
Eucgr.J02449 10.0kb downstream 10.0kb downstream 10000 false Chr10: 29800824-29810823 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051813 5270 Rosid View MSA
123748632 5271 Pentapetalae View MSA
122772727 5272 Eudicot View MSA
122049775 5273 Angiosperm View MSA
121352090 5274 Embryophyte View MSA
123382534 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.03378 0.0 12.0215    
cufflinks 1.82871 0.0 5.10307    
cufflinks 3.65149 0.0 9.28992    
cufflinks 2.38469 0.0 6.46372    
cufflinks 1.12764 0.0 3.38532   Low
cufflinks 5.92752 0.0 13.9298   High

0 Strain