Gene : Eucgr.J00193 E. grandis v2.0
Defline:  (1 of 2) PTHR10292 - CLATHRIN HEAVY CHAIN Genomic Order:  171
Name:  ? Eucgr.J00193 Secondary Identifier:  ? PAC:32032477
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00193 0.5kb upstream 0.5kb upstream 13173 true Chr10: 1972797-1985969 Eucalyptus grandis
Eucgr.J00193 0.5kb upstream 0.5kb upstream 500 false Chr10: 1985470-1985969 Eucalyptus grandis
Eucgr.J00193 0.5kb downstream 0.5kb downstream 13173 true Chr10: 1972297-1985469 Eucalyptus grandis
Eucgr.J00193 0.5kb downstream 0.5kb downstream 500 false Chr10: 1972297-1972796 Eucalyptus grandis
Eucgr.J00193 1.0kb upstream 1.0kb upstream 13673 true Chr10: 1972797-1986469 Eucalyptus grandis
Eucgr.J00193 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1985470-1986469 Eucalyptus grandis
Eucgr.J00193 1.0kb downstream 1.0kb downstream 13673 true Chr10: 1971797-1985469 Eucalyptus grandis
Eucgr.J00193 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1971797-1972796 Eucalyptus grandis
Eucgr.J00193 2.0kb upstream 2.0kb upstream 14673 true Chr10: 1972797-1987469 Eucalyptus grandis
Eucgr.J00193 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1985470-1987469 Eucalyptus grandis
Eucgr.J00193 2.0kb downstream 2.0kb downstream 14673 true Chr10: 1970797-1985469 Eucalyptus grandis
Eucgr.J00193 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1970797-1972796 Eucalyptus grandis
Eucgr.J00193 5.0kb upstream 5.0kb upstream 17673 true Chr10: 1972797-1990469 Eucalyptus grandis
Eucgr.J00193 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1985470-1990469 Eucalyptus grandis
Eucgr.J00193 5.0kb downstream 5.0kb downstream 17673 true Chr10: 1967797-1985469 Eucalyptus grandis
Eucgr.J00193 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1967797-1972796 Eucalyptus grandis
Eucgr.J00193 10.0kb upstream 10.0kb upstream 22673 true Chr10: 1972797-1995469 Eucalyptus grandis
Eucgr.J00193 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1985470-1995469 Eucalyptus grandis
Eucgr.J00193 10.0kb downstream 10.0kb downstream 22673 true Chr10: 1962797-1985469 Eucalyptus grandis
Eucgr.J00193 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1962797-1972796 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027117 5273 Angiosperm View MSA
124064401 5270 Rosid View MSA
123744166 5271 Pentapetalae View MSA
122788856 5272 Eudicot View MSA
121350817 5274 Embryophyte View MSA
123428843 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.3976 0.0 77.6234 High  
cufflinks 63.1891 0.0 191.734 High  
cufflinks 28.8883 0.0 87.4917 High  
cufflinks 119.067 0.0 448.424 High High
cufflinks 28.7634 0.0 79.4184    
cufflinks 37.1055 0.0 96.2085 High  

0 Strain