Gene : Eucgr.I01536 E. grandis v2.0
Defline:  (1 of 2) PTHR24349:SF83 - CALCIUM-DEPENDENT PROTEIN KINASE 6 Genomic Order:  1265
Name:  ? Eucgr.I01536 Secondary Identifier:  ? PAC:32065603
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01536 0.5kb upstream 0.5kb upstream 5948 true Chr09: 25383091-25389038 Eucalyptus grandis
Eucgr.I01536 0.5kb upstream 0.5kb upstream 500 false Chr09: 25383091-25383590 Eucalyptus grandis
Eucgr.I01536 0.5kb downstream 0.5kb downstream 5948 true Chr09: 25383591-25389538 Eucalyptus grandis
Eucgr.I01536 0.5kb downstream 0.5kb downstream 500 false Chr09: 25389039-25389538 Eucalyptus grandis
Eucgr.I01536 1.0kb upstream 1.0kb upstream 6448 true Chr09: 25382591-25389038 Eucalyptus grandis
Eucgr.I01536 1.0kb upstream 1.0kb upstream 1000 false Chr09: 25382591-25383590 Eucalyptus grandis
Eucgr.I01536 1.0kb downstream 1.0kb downstream 6448 true Chr09: 25383591-25390038 Eucalyptus grandis
Eucgr.I01536 1.0kb downstream 1.0kb downstream 1000 false Chr09: 25389039-25390038 Eucalyptus grandis
Eucgr.I01536 2.0kb upstream 2.0kb upstream 7448 true Chr09: 25381591-25389038 Eucalyptus grandis
Eucgr.I01536 2.0kb upstream 2.0kb upstream 2000 false Chr09: 25381591-25383590 Eucalyptus grandis
Eucgr.I01536 2.0kb downstream 2.0kb downstream 7448 true Chr09: 25383591-25391038 Eucalyptus grandis
Eucgr.I01536 2.0kb downstream 2.0kb downstream 2000 false Chr09: 25389039-25391038 Eucalyptus grandis
Eucgr.I01536 5.0kb upstream 5.0kb upstream 10448 true Chr09: 25378591-25389038 Eucalyptus grandis
Eucgr.I01536 5.0kb upstream 5.0kb upstream 5000 false Chr09: 25378591-25383590 Eucalyptus grandis
Eucgr.I01536 5.0kb downstream 5.0kb downstream 10448 true Chr09: 25383591-25394038 Eucalyptus grandis
Eucgr.I01536 5.0kb downstream 5.0kb downstream 5000 false Chr09: 25389039-25394038 Eucalyptus grandis
Eucgr.I01536 10.0kb upstream 10.0kb upstream 15448 true Chr09: 25373591-25389038 Eucalyptus grandis
Eucgr.I01536 10.0kb upstream 10.0kb upstream 10000 false Chr09: 25373591-25383590 Eucalyptus grandis
Eucgr.I01536 10.0kb downstream 10.0kb downstream 15448 true Chr09: 25383591-25399038 Eucalyptus grandis
Eucgr.I01536 10.0kb downstream 10.0kb downstream 10000 false Chr09: 25389039-25399038 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064414 5270 Rosid View MSA
123746824 5271 Pentapetalae View MSA
122786151 5272 Eudicot View MSA
122046478 5273 Angiosperm View MSA
121350946 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 80.0825 0.0 229.291 High  
cufflinks 116.248 0.0 331.499 High  
cufflinks 78.8013 0.0 225.237 High  
cufflinks 157.35 0.0 487.986 High High
cufflinks 113.888 0.0 321.823 High  
cufflinks 67.6155 0.0 157.09 High Low

0 Strain