Gene : Eucgr.I00661 E. grandis v2.0
Defline:  (1 of 1) PTHR31908:SF2 - NUCLEAR MATRIX CONSTITUENT PROTEIN 1-LIKE PROTEIN-RELATED Genomic Order:  524
Name:  ? Eucgr.I00661 Secondary Identifier:  ? PAC:32064670
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00661 0.5kb upstream 0.5kb upstream 6852 true Chr09: 13814141-13820992 Eucalyptus grandis
Eucgr.I00661 0.5kb upstream 0.5kb upstream 500 false Chr09: 13814141-13814640 Eucalyptus grandis
Eucgr.I00661 0.5kb downstream 0.5kb downstream 6852 true Chr09: 13814641-13821492 Eucalyptus grandis
Eucgr.I00661 0.5kb downstream 0.5kb downstream 500 false Chr09: 13820993-13821492 Eucalyptus grandis
Eucgr.I00661 1.0kb upstream 1.0kb upstream 7352 true Chr09: 13813641-13820992 Eucalyptus grandis
Eucgr.I00661 1.0kb upstream 1.0kb upstream 1000 false Chr09: 13813641-13814640 Eucalyptus grandis
Eucgr.I00661 1.0kb downstream 1.0kb downstream 7352 true Chr09: 13814641-13821992 Eucalyptus grandis
Eucgr.I00661 1.0kb downstream 1.0kb downstream 1000 false Chr09: 13820993-13821992 Eucalyptus grandis
Eucgr.I00661 2.0kb upstream 2.0kb upstream 8352 true Chr09: 13812641-13820992 Eucalyptus grandis
Eucgr.I00661 2.0kb upstream 2.0kb upstream 2000 false Chr09: 13812641-13814640 Eucalyptus grandis
Eucgr.I00661 2.0kb downstream 2.0kb downstream 8352 true Chr09: 13814641-13822992 Eucalyptus grandis
Eucgr.I00661 2.0kb downstream 2.0kb downstream 2000 false Chr09: 13820993-13822992 Eucalyptus grandis
Eucgr.I00661 5.0kb upstream 5.0kb upstream 11352 true Chr09: 13809641-13820992 Eucalyptus grandis
Eucgr.I00661 5.0kb upstream 5.0kb upstream 5000 false Chr09: 13809641-13814640 Eucalyptus grandis
Eucgr.I00661 5.0kb downstream 5.0kb downstream 11352 true Chr09: 13814641-13825992 Eucalyptus grandis
Eucgr.I00661 5.0kb downstream 5.0kb downstream 5000 false Chr09: 13820993-13825992 Eucalyptus grandis
Eucgr.I00661 10.0kb upstream 10.0kb upstream 16352 true Chr09: 13804641-13820992 Eucalyptus grandis
Eucgr.I00661 10.0kb upstream 10.0kb upstream 10000 false Chr09: 13804641-13814640 Eucalyptus grandis
Eucgr.I00661 10.0kb downstream 10.0kb downstream 16352 true Chr09: 13814641-13830992 Eucalyptus grandis
Eucgr.I00661 10.0kb downstream 10.0kb downstream 10000 false Chr09: 13820993-13830992 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068788 5270 Rosid View MSA
123740792 5271 Pentapetalae View MSA
122790412 5272 Eudicot View MSA
122047030 5273 Angiosperm View MSA
121346070 5274 Embryophyte View MSA
123380319 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.84034 0.0 15.2158    
cufflinks 7.21374 0.0 16.0099    
cufflinks 6.80279 0.0 15.1118    
cufflinks 10.3093 0.0 22.8019    
cufflinks 9.27383 0.0 20.5161    
cufflinks 11.454 0.0 25.3304   High

0 Strain