Gene : Eucgr.I00040 E. grandis v2.0
Defline:  (1 of 13) KOG1427 - Uncharacterized conserved protein, contains RCC1 domain Genomic Order:  35
Name:  ? Eucgr.I00040 Secondary Identifier:  ? PAC:32064248
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00040 0.5kb upstream 0.5kb upstream 9752 true Chr09: 673790-683541 Eucalyptus grandis
Eucgr.I00040 0.5kb upstream 0.5kb upstream 500 false Chr09: 673790-674289 Eucalyptus grandis
Eucgr.I00040 0.5kb downstream 0.5kb downstream 9752 true Chr09: 674290-684041 Eucalyptus grandis
Eucgr.I00040 0.5kb downstream 0.5kb downstream 500 false Chr09: 683542-684041 Eucalyptus grandis
Eucgr.I00040 1.0kb upstream 1.0kb upstream 10252 true Chr09: 673290-683541 Eucalyptus grandis
Eucgr.I00040 1.0kb upstream 1.0kb upstream 1000 false Chr09: 673290-674289 Eucalyptus grandis
Eucgr.I00040 1.0kb downstream 1.0kb downstream 10252 true Chr09: 674290-684541 Eucalyptus grandis
Eucgr.I00040 1.0kb downstream 1.0kb downstream 1000 false Chr09: 683542-684541 Eucalyptus grandis
Eucgr.I00040 2.0kb upstream 2.0kb upstream 11252 true Chr09: 672290-683541 Eucalyptus grandis
Eucgr.I00040 2.0kb upstream 2.0kb upstream 2000 false Chr09: 672290-674289 Eucalyptus grandis
Eucgr.I00040 2.0kb downstream 2.0kb downstream 11252 true Chr09: 674290-685541 Eucalyptus grandis
Eucgr.I00040 2.0kb downstream 2.0kb downstream 2000 false Chr09: 683542-685541 Eucalyptus grandis
Eucgr.I00040 5.0kb upstream 5.0kb upstream 14252 true Chr09: 669290-683541 Eucalyptus grandis
Eucgr.I00040 5.0kb upstream 5.0kb upstream 5000 false Chr09: 669290-674289 Eucalyptus grandis
Eucgr.I00040 5.0kb downstream 5.0kb downstream 14252 true Chr09: 674290-688541 Eucalyptus grandis
Eucgr.I00040 5.0kb downstream 5.0kb downstream 5000 false Chr09: 683542-688541 Eucalyptus grandis
Eucgr.I00040 10.0kb upstream 10.0kb upstream 19252 true Chr09: 664290-683541 Eucalyptus grandis
Eucgr.I00040 10.0kb upstream 10.0kb upstream 10000 false Chr09: 664290-674289 Eucalyptus grandis
Eucgr.I00040 10.0kb downstream 10.0kb downstream 19252 true Chr09: 674290-693541 Eucalyptus grandis
Eucgr.I00040 10.0kb downstream 10.0kb downstream 10000 false Chr09: 683542-693541 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067289 5270 Rosid View MSA
123750036 5271 Pentapetalae View MSA
122789173 5272 Eudicot View MSA
122046022 5273 Angiosperm View MSA
121348497 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.21844 0.0 22.5061    
cufflinks 14.2428 0.0 32.7284   High
cufflinks 7.63522 0.0 21.1813    
cufflinks 12.2398 0.0 31.1459    
cufflinks 9.2035 0.0 21.1213    
cufflinks 4.00135 0.0 10.1679   Low

0 Strain