Gene : Eucgr.H04554 E. grandis v2.0
Defline:  (1 of 5) PTHR12612:SF0 - NUCLEAR TRANSPORT FACTOR 2 Genomic Order:  3466
Name:  ? Eucgr.H04554 Secondary Identifier:  ? PAC:32044166
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04554 0.5kb upstream 0.5kb upstream 1573 true Chr08: 61962095-61963667 Eucalyptus grandis
Eucgr.H04554 0.5kb upstream 0.5kb upstream 500 false Chr08: 61962095-61962594 Eucalyptus grandis
Eucgr.H04554 0.5kb downstream 0.5kb downstream 1573 true Chr08: 61962595-61964167 Eucalyptus grandis
Eucgr.H04554 0.5kb downstream 0.5kb downstream 500 false Chr08: 61963668-61964167 Eucalyptus grandis
Eucgr.H04554 1.0kb upstream 1.0kb upstream 2073 true Chr08: 61961595-61963667 Eucalyptus grandis
Eucgr.H04554 1.0kb upstream 1.0kb upstream 1000 false Chr08: 61961595-61962594 Eucalyptus grandis
Eucgr.H04554 1.0kb downstream 1.0kb downstream 2073 true Chr08: 61962595-61964667 Eucalyptus grandis
Eucgr.H04554 1.0kb downstream 1.0kb downstream 1000 false Chr08: 61963668-61964667 Eucalyptus grandis
Eucgr.H04554 2.0kb upstream 2.0kb upstream 3073 true Chr08: 61960595-61963667 Eucalyptus grandis
Eucgr.H04554 2.0kb upstream 2.0kb upstream 2000 false Chr08: 61960595-61962594 Eucalyptus grandis
Eucgr.H04554 2.0kb downstream 2.0kb downstream 3073 true Chr08: 61962595-61965667 Eucalyptus grandis
Eucgr.H04554 2.0kb downstream 2.0kb downstream 2000 false Chr08: 61963668-61965667 Eucalyptus grandis
Eucgr.H04554 5.0kb upstream 5.0kb upstream 6073 true Chr08: 61957595-61963667 Eucalyptus grandis
Eucgr.H04554 5.0kb upstream 5.0kb upstream 5000 false Chr08: 61957595-61962594 Eucalyptus grandis
Eucgr.H04554 5.0kb downstream 5.0kb downstream 6073 true Chr08: 61962595-61968667 Eucalyptus grandis
Eucgr.H04554 5.0kb downstream 5.0kb downstream 5000 false Chr08: 61963668-61968667 Eucalyptus grandis
Eucgr.H04554 10.0kb upstream 10.0kb upstream 11073 true Chr08: 61952595-61963667 Eucalyptus grandis
Eucgr.H04554 10.0kb upstream 10.0kb upstream 10000 false Chr08: 61952595-61962594 Eucalyptus grandis
Eucgr.H04554 10.0kb downstream 10.0kb downstream 11073 true Chr08: 61962595-61973667 Eucalyptus grandis
Eucgr.H04554 10.0kb downstream 10.0kb downstream 10000 false Chr08: 61963668-61973667 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121783996 5273 Angiosperm View MSA
124049914 5270 Rosid View MSA
123755821 5271 Pentapetalae View MSA
122777039 5272 Eudicot View MSA
121055431 5274 Embryophyte View MSA
123095365 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0240527 0.0 0.247269 Low Low
cufflinks 1.07635 0.0 3.46525    
cufflinks 0.40874 0.0 1.50169    
cufflinks 2.04947 0.0 6.11486    
cufflinks 4.03213 0.0 11.1247   High
cufflinks 1.00175 0.0 3.21479    

0 Strain