Gene : Eucgr.H04214 E. grandis v2.0
Defline:  (1 of 5) PTHR12612:SF0 - NUCLEAR TRANSPORT FACTOR 2 Genomic Order:  3190
Name:  ? Eucgr.H04214 Secondary Identifier:  ? PAC:32044580
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04214 0.5kb upstream 0.5kb upstream 1529 true Chr08: 56794236-56795764 Eucalyptus grandis
Eucgr.H04214 0.5kb upstream 0.5kb upstream 500 false Chr08: 56795265-56795764 Eucalyptus grandis
Eucgr.H04214 0.5kb downstream 0.5kb downstream 1529 true Chr08: 56793736-56795264 Eucalyptus grandis
Eucgr.H04214 0.5kb downstream 0.5kb downstream 500 false Chr08: 56793736-56794235 Eucalyptus grandis
Eucgr.H04214 1.0kb upstream 1.0kb upstream 2029 true Chr08: 56794236-56796264 Eucalyptus grandis
Eucgr.H04214 1.0kb upstream 1.0kb upstream 1000 false Chr08: 56795265-56796264 Eucalyptus grandis
Eucgr.H04214 1.0kb downstream 1.0kb downstream 2029 true Chr08: 56793236-56795264 Eucalyptus grandis
Eucgr.H04214 1.0kb downstream 1.0kb downstream 1000 false Chr08: 56793236-56794235 Eucalyptus grandis
Eucgr.H04214 2.0kb upstream 2.0kb upstream 3029 true Chr08: 56794236-56797264 Eucalyptus grandis
Eucgr.H04214 2.0kb upstream 2.0kb upstream 2000 false Chr08: 56795265-56797264 Eucalyptus grandis
Eucgr.H04214 2.0kb downstream 2.0kb downstream 3029 true Chr08: 56792236-56795264 Eucalyptus grandis
Eucgr.H04214 2.0kb downstream 2.0kb downstream 2000 false Chr08: 56792236-56794235 Eucalyptus grandis
Eucgr.H04214 5.0kb upstream 5.0kb upstream 6029 true Chr08: 56794236-56800264 Eucalyptus grandis
Eucgr.H04214 5.0kb upstream 5.0kb upstream 5000 false Chr08: 56795265-56800264 Eucalyptus grandis
Eucgr.H04214 5.0kb downstream 5.0kb downstream 6029 true Chr08: 56789236-56795264 Eucalyptus grandis
Eucgr.H04214 5.0kb downstream 5.0kb downstream 5000 false Chr08: 56789236-56794235 Eucalyptus grandis
Eucgr.H04214 10.0kb upstream 10.0kb upstream 11029 true Chr08: 56794236-56805264 Eucalyptus grandis
Eucgr.H04214 10.0kb upstream 10.0kb upstream 10000 false Chr08: 56795265-56805264 Eucalyptus grandis
Eucgr.H04214 10.0kb downstream 10.0kb downstream 11029 true Chr08: 56784236-56795264 Eucalyptus grandis
Eucgr.H04214 10.0kb downstream 10.0kb downstream 10000 false Chr08: 56784236-56794235 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121783996 5273 Angiosperm View MSA
124049914 5270 Rosid View MSA
123755821 5271 Pentapetalae View MSA
122777039 5272 Eudicot View MSA
121055431 5274 Embryophyte View MSA
123095365 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.046 0.0 31.7325    
cufflinks 27.9206 0.0 63.8527   High
cufflinks 10.8499 0.0 27.0117    
cufflinks 23.183 0.0 53.7197    
cufflinks 23.0803 0.0 53.3854    
cufflinks 9.03751 0.0 22.6818   Low

0 Strain