Gene : Eucgr.H04218 E. grandis v2.0
Defline:  (1 of 1) PTHR10799:SF350 - TRANSCRIPTIONAL REGULATOR ATRX HOMOLOG Genomic Order:  3194
Name:  ? Eucgr.H04218 Secondary Identifier:  ? PAC:32044081
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04218 0.5kb upstream 0.5kb upstream 14609 true Chr08: 56865304-56879912 Eucalyptus grandis
Eucgr.H04218 0.5kb upstream 0.5kb upstream 500 false Chr08: 56865304-56865803 Eucalyptus grandis
Eucgr.H04218 0.5kb downstream 0.5kb downstream 14609 true Chr08: 56865804-56880412 Eucalyptus grandis
Eucgr.H04218 0.5kb downstream 0.5kb downstream 500 false Chr08: 56879913-56880412 Eucalyptus grandis
Eucgr.H04218 1.0kb upstream 1.0kb upstream 15109 true Chr08: 56864804-56879912 Eucalyptus grandis
Eucgr.H04218 1.0kb upstream 1.0kb upstream 1000 false Chr08: 56864804-56865803 Eucalyptus grandis
Eucgr.H04218 1.0kb downstream 1.0kb downstream 15109 true Chr08: 56865804-56880912 Eucalyptus grandis
Eucgr.H04218 1.0kb downstream 1.0kb downstream 1000 false Chr08: 56879913-56880912 Eucalyptus grandis
Eucgr.H04218 2.0kb upstream 2.0kb upstream 16109 true Chr08: 56863804-56879912 Eucalyptus grandis
Eucgr.H04218 2.0kb upstream 2.0kb upstream 2000 false Chr08: 56863804-56865803 Eucalyptus grandis
Eucgr.H04218 2.0kb downstream 2.0kb downstream 16109 true Chr08: 56865804-56881912 Eucalyptus grandis
Eucgr.H04218 2.0kb downstream 2.0kb downstream 2000 false Chr08: 56879913-56881912 Eucalyptus grandis
Eucgr.H04218 5.0kb upstream 5.0kb upstream 19109 true Chr08: 56860804-56879912 Eucalyptus grandis
Eucgr.H04218 5.0kb upstream 5.0kb upstream 5000 false Chr08: 56860804-56865803 Eucalyptus grandis
Eucgr.H04218 5.0kb downstream 5.0kb downstream 19109 true Chr08: 56865804-56884912 Eucalyptus grandis
Eucgr.H04218 5.0kb downstream 5.0kb downstream 5000 false Chr08: 56879913-56884912 Eucalyptus grandis
Eucgr.H04218 10.0kb upstream 10.0kb upstream 24109 true Chr08: 56855804-56879912 Eucalyptus grandis
Eucgr.H04218 10.0kb upstream 10.0kb upstream 10000 false Chr08: 56855804-56865803 Eucalyptus grandis
Eucgr.H04218 10.0kb downstream 10.0kb downstream 24109 true Chr08: 56865804-56889912 Eucalyptus grandis
Eucgr.H04218 10.0kb downstream 10.0kb downstream 10000 false Chr08: 56879913-56889912 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061145 5270 Rosid View MSA
123747129 5271 Pentapetalae View MSA
122792246 5272 Eudicot View MSA
122043506 5273 Angiosperm View MSA
121348350 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.7382 0.0 110.067 High High
cufflinks 13.4982 0.0 30.0936   Low
cufflinks 29.8456 0.0 69.5337 High  
cufflinks 18.1293 0.0 40.9997    
cufflinks 17.8354 0.0 40.1397    
cufflinks 29.4143 0.0 67.7209    

0 Strain