Gene : Eucgr.H04447 E. grandis v2.0
Defline:  (1 of 8) PTHR12612:SF10 - NUCLEAR TRANSPORT FACTOR 2-LIKE PROTEIN Genomic Order:  3382
Name:  ? Eucgr.H04447 Secondary Identifier:  ? PAC:32045763
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04447 0.5kb upstream 0.5kb upstream 1547 true Chr08: 60214879-60216425 Eucalyptus grandis
Eucgr.H04447 0.5kb upstream 0.5kb upstream 500 false Chr08: 60214879-60215378 Eucalyptus grandis
Eucgr.H04447 0.5kb downstream 0.5kb downstream 1547 true Chr08: 60215379-60216925 Eucalyptus grandis
Eucgr.H04447 0.5kb downstream 0.5kb downstream 500 false Chr08: 60216426-60216925 Eucalyptus grandis
Eucgr.H04447 1.0kb upstream 1.0kb upstream 2047 true Chr08: 60214379-60216425 Eucalyptus grandis
Eucgr.H04447 1.0kb upstream 1.0kb upstream 1000 false Chr08: 60214379-60215378 Eucalyptus grandis
Eucgr.H04447 1.0kb downstream 1.0kb downstream 2047 true Chr08: 60215379-60217425 Eucalyptus grandis
Eucgr.H04447 1.0kb downstream 1.0kb downstream 1000 false Chr08: 60216426-60217425 Eucalyptus grandis
Eucgr.H04447 2.0kb upstream 2.0kb upstream 3047 true Chr08: 60213379-60216425 Eucalyptus grandis
Eucgr.H04447 2.0kb upstream 2.0kb upstream 2000 false Chr08: 60213379-60215378 Eucalyptus grandis
Eucgr.H04447 2.0kb downstream 2.0kb downstream 3047 true Chr08: 60215379-60218425 Eucalyptus grandis
Eucgr.H04447 2.0kb downstream 2.0kb downstream 2000 false Chr08: 60216426-60218425 Eucalyptus grandis
Eucgr.H04447 5.0kb upstream 5.0kb upstream 6047 true Chr08: 60210379-60216425 Eucalyptus grandis
Eucgr.H04447 5.0kb upstream 5.0kb upstream 5000 false Chr08: 60210379-60215378 Eucalyptus grandis
Eucgr.H04447 5.0kb downstream 5.0kb downstream 6047 true Chr08: 60215379-60221425 Eucalyptus grandis
Eucgr.H04447 5.0kb downstream 5.0kb downstream 5000 false Chr08: 60216426-60221425 Eucalyptus grandis
Eucgr.H04447 10.0kb upstream 10.0kb upstream 11047 true Chr08: 60205379-60216425 Eucalyptus grandis
Eucgr.H04447 10.0kb upstream 10.0kb upstream 10000 false Chr08: 60205379-60215378 Eucalyptus grandis
Eucgr.H04447 10.0kb downstream 10.0kb downstream 11047 true Chr08: 60215379-60226425 Eucalyptus grandis
Eucgr.H04447 10.0kb downstream 10.0kb downstream 10000 false Chr08: 60216426-60226425 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121783996 5273 Angiosperm View MSA
124049914 5270 Rosid View MSA
123755821 5271 Pentapetalae View MSA
122777039 5272 Eudicot View MSA
121055431 5274 Embryophyte View MSA
123095365 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.87756 0.0 10.5792   Low
cufflinks 20.3546 0.0 47.4581    
cufflinks 5.4116 0.0 14.3897    
cufflinks 32.5061 0.0 73.5051    
cufflinks 47.749 0.0 106.097 High High
cufflinks 4.66633 0.0 12.4068    

0 Strain