Gene : Eucgr.H00648 E. grandis v2.0
Defline:  (1 of 1) PTHR35698:SF1 - DNA-BINDING PROTEIN RHL1 Genomic Order:  577
Name:  ? Eucgr.H00648 Secondary Identifier:  ? PAC:32042828
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00648 0.5kb upstream 0.5kb upstream 8827 true Chr08: 8945765-8954591 Eucalyptus grandis
Eucgr.H00648 0.5kb upstream 0.5kb upstream 500 false Chr08: 8945765-8946264 Eucalyptus grandis
Eucgr.H00648 0.5kb downstream 0.5kb downstream 8827 true Chr08: 8946265-8955091 Eucalyptus grandis
Eucgr.H00648 0.5kb downstream 0.5kb downstream 500 false Chr08: 8954592-8955091 Eucalyptus grandis
Eucgr.H00648 1.0kb upstream 1.0kb upstream 9327 true Chr08: 8945265-8954591 Eucalyptus grandis
Eucgr.H00648 1.0kb upstream 1.0kb upstream 1000 false Chr08: 8945265-8946264 Eucalyptus grandis
Eucgr.H00648 1.0kb downstream 1.0kb downstream 9327 true Chr08: 8946265-8955591 Eucalyptus grandis
Eucgr.H00648 1.0kb downstream 1.0kb downstream 1000 false Chr08: 8954592-8955591 Eucalyptus grandis
Eucgr.H00648 2.0kb upstream 2.0kb upstream 10327 true Chr08: 8944265-8954591 Eucalyptus grandis
Eucgr.H00648 2.0kb upstream 2.0kb upstream 2000 false Chr08: 8944265-8946264 Eucalyptus grandis
Eucgr.H00648 2.0kb downstream 2.0kb downstream 10327 true Chr08: 8946265-8956591 Eucalyptus grandis
Eucgr.H00648 2.0kb downstream 2.0kb downstream 2000 false Chr08: 8954592-8956591 Eucalyptus grandis
Eucgr.H00648 5.0kb upstream 5.0kb upstream 13327 true Chr08: 8941265-8954591 Eucalyptus grandis
Eucgr.H00648 5.0kb upstream 5.0kb upstream 5000 false Chr08: 8941265-8946264 Eucalyptus grandis
Eucgr.H00648 5.0kb downstream 5.0kb downstream 13327 true Chr08: 8946265-8959591 Eucalyptus grandis
Eucgr.H00648 5.0kb downstream 5.0kb downstream 5000 false Chr08: 8954592-8959591 Eucalyptus grandis
Eucgr.H00648 10.0kb upstream 10.0kb upstream 18327 true Chr08: 8936265-8954591 Eucalyptus grandis
Eucgr.H00648 10.0kb upstream 10.0kb upstream 10000 false Chr08: 8936265-8946264 Eucalyptus grandis
Eucgr.H00648 10.0kb downstream 10.0kb downstream 18327 true Chr08: 8946265-8964591 Eucalyptus grandis
Eucgr.H00648 10.0kb downstream 10.0kb downstream 10000 false Chr08: 8954592-8964591 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051077 5270 Rosid View MSA
123745931 5271 Pentapetalae View MSA
122792650 5272 Eudicot View MSA
122048077 5273 Angiosperm View MSA
121344975 5274 Embryophyte View MSA
123426028 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.81651 0.0 4.83564    
cufflinks 1.00864 0.0 2.85662    
cufflinks 2.42561 0.0 6.26915   High
cufflinks 0.487594 0.0 1.48687   Low
cufflinks 0.442783 0.0 1.36955 Low Low
cufflinks 1.96478 0.0 5.18765    

0 Strain