Gene : Eucgr.G03181 E. grandis v2.0
Defline:  (1 of 1) PTHR12596:SF2 - RAN-BINDING PROTEIN 16 Genomic Order:  2643
Name:  ? Eucgr.G03181 Secondary Identifier:  ? PAC:32072720
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03181 0.5kb upstream 0.5kb upstream 14687 true Chr07: 52757010-52771696 Eucalyptus grandis
Eucgr.G03181 0.5kb upstream 0.5kb upstream 500 false Chr07: 52771197-52771696 Eucalyptus grandis
Eucgr.G03181 0.5kb downstream 0.5kb downstream 14687 true Chr07: 52756510-52771196 Eucalyptus grandis
Eucgr.G03181 0.5kb downstream 0.5kb downstream 500 false Chr07: 52756510-52757009 Eucalyptus grandis
Eucgr.G03181 1.0kb upstream 1.0kb upstream 15187 true Chr07: 52757010-52772196 Eucalyptus grandis
Eucgr.G03181 1.0kb upstream 1.0kb upstream 1000 false Chr07: 52771197-52772196 Eucalyptus grandis
Eucgr.G03181 1.0kb downstream 1.0kb downstream 15187 true Chr07: 52756010-52771196 Eucalyptus grandis
Eucgr.G03181 1.0kb downstream 1.0kb downstream 1000 false Chr07: 52756010-52757009 Eucalyptus grandis
Eucgr.G03181 2.0kb upstream 2.0kb upstream 16187 true Chr07: 52757010-52773196 Eucalyptus grandis
Eucgr.G03181 2.0kb upstream 2.0kb upstream 2000 false Chr07: 52771197-52773196 Eucalyptus grandis
Eucgr.G03181 2.0kb downstream 2.0kb downstream 16187 true Chr07: 52755010-52771196 Eucalyptus grandis
Eucgr.G03181 2.0kb downstream 2.0kb downstream 2000 false Chr07: 52755010-52757009 Eucalyptus grandis
Eucgr.G03181 5.0kb upstream 5.0kb upstream 19187 true Chr07: 52757010-52776196 Eucalyptus grandis
Eucgr.G03181 5.0kb upstream 5.0kb upstream 5000 false Chr07: 52771197-52776196 Eucalyptus grandis
Eucgr.G03181 5.0kb downstream 5.0kb downstream 19187 true Chr07: 52752010-52771196 Eucalyptus grandis
Eucgr.G03181 5.0kb downstream 5.0kb downstream 5000 false Chr07: 52752010-52757009 Eucalyptus grandis
Eucgr.G03181 10.0kb upstream 10.0kb upstream 24187 true Chr07: 52757010-52781196 Eucalyptus grandis
Eucgr.G03181 10.0kb upstream 10.0kb upstream 10000 false Chr07: 52771197-52781196 Eucalyptus grandis
Eucgr.G03181 10.0kb downstream 10.0kb downstream 24187 true Chr07: 52747010-52771196 Eucalyptus grandis
Eucgr.G03181 10.0kb downstream 10.0kb downstream 10000 false Chr07: 52747010-52757009 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066817 5270 Rosid View MSA
123737109 5271 Pentapetalae View MSA
122790636 5272 Eudicot View MSA
122043679 5273 Angiosperm View MSA
121344898 5274 Embryophyte View MSA
123423878 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.56916 0.0 19.1506   Low
cufflinks 15.2724 0.0 33.7832    
cufflinks 9.8352 0.0 21.8578    
cufflinks 18.003 0.0 39.8917   High
cufflinks 10.2853 0.0 22.8345    
cufflinks 11.893 0.0 26.381    

0 Strain